Gene Sros_0750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0750 
Symbol 
ID8664022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp766123 
End bp767802 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC transporter, periplasmic solute-binding protein 
Protein accessionYP_003336512 
Protein GI271962316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0146598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTGGC TGTCGCATGA AAGTGGGTCC CCCGTGCCCG ATCTCCCCGA TGCCGCCCTC 
ACCCGACGCT CTCTTCTGAG ATCCATCGCC ATCGTGGGAG GCCTGGCCGC GTTCCCGGCT
CTCGTCACGG CCTGTGGCTC GGACGGCCCG GCGGCCACGT CCGGGGGCGC CGGCGGCGCG
GCGAAGTCCC TCGACGTCCT GAAGGTCGCG CTGCCCTCCT CCATCAGCTC GCTGGACGCG
AGCAAGGAGG CGGGCATCAT GAACTACGTC GTCGCCCTCC TCTGCCAGGA GGCGCTCGTC
GGAGTCGGCC AGGACGGCAG CCTCCAGCCG GCCCTGGCCG AGTCGTGGAG CCGTAAGGAC
CCGAAGACCT ACGTCTACAA GATCCGCAGT GGCGTCACCT TCGCCGACGG GACGCCGCTG
ACCGCCGACG ACATCGTGGC CAGCCTCGAC CTGCACGCCA AGAAGGGCTC CACCTCGGCC
TTCGCCTACG CCTACGCCAA CGTCGACAAG ATCGAGGCCG GTGGACCCGC CGAGGTGACC
ATCACGCTGA AGCAGCCCGA CGCGTCCTTC GCCTGGACCC CGTCCCCGGG GACCCTTCTC
GTGACGAGCC GGAAGTTCAT CGAGGCCACC GGCCAGGACA TCGGCACCCC CACCGGGAAG
ATCCTCGGGA CCGGGCCGTA CCGGGTGACC GAGTTCGCGC CCGACTCGCA CGTGACGCTG
GAGCGCAACG ACGCCTGGTG GGGCGGCAAG GCGCCGTACC GCCAGATCAG GCTCGACTTC
ATCCCCGAGG AGTCCACCCG GCTGCTCGCC ATGCGGGGCG GCTCGGTCGA CGTCGCGCTG
AACGTGCCCG CCGAGCAGAT CGACCAGTGG AAGGCGGTCT CCGGCGTCGA GCTGAAGACG
GCCAGCGACC GTTCCCTGGT CACGCTCGCC TTCAACACCG CCAAGAAGCC GTGGAACGAC
ATCCACGTCC GCAAGGCGGT CGCCCACGCG GTCGACAGGG ACGGCATCGT GCGCAGCGTC
CTGCGCGGCC ACGGTCAGGT CGCCACCACC GTCACCGACC CCGCCCAGTG GGGCGGCGTG
CTCGGCGAGG CCGAGGTCAA GAGCCTGTAC GAGAGCATCC CGCAGTACGG CTTCGACCTC
GCCAAGGCCC GCGCCGAGCT GGCCTTGTCG TCGGTTCCCG GCGGCTTCAG CGACGTGCTG
ACCTACCCCG GCAGCGGACC GCAGCTCGGC AGGGCCGCGC TCACCCTCGC GCAGAACCTC
AAGACCATCG GGATCACCCT GGAGGTCAAG GAGGTCCCGC TGGAGCAGTG GATCGCCGAG
CTCGGCAAGC ACGCCTCCGG CATCTACCTC GGCTGGTACT TCGCGACGAC GGGCGATCCG
TCGGAGTACA TCCAGCAGCT CCTCAACGGC GCCTTCGTCG GCGAGAACGG TTCCAACATC
GCCGAGTACG CCGACGACGA GGTGACCGGG CTGCTCGACC AGGCCAAGAA GGGCACCGAC
GAGGCGGCCC GGGGCAAGCT CCTCGGGGAG GCGCTGGTCA AGGCCGCCGC CGACGTCCCC
TACCAGCCGC TGTGGTGGGG CGAGGCGGCG ACCGCGTTCG GTCCCGGTGT CGGTGCCGCG
GACTTCGGGC CCTACTTCTT CGTCGGCCCC TGGGCCGCCC AGCTCTCCAC CCGCTCGTGA
 
Protein sequence
MSWLSHESGS PVPDLPDAAL TRRSLLRSIA IVGGLAAFPA LVTACGSDGP AATSGGAGGA 
AKSLDVLKVA LPSSISSLDA SKEAGIMNYV VALLCQEALV GVGQDGSLQP ALAESWSRKD
PKTYVYKIRS GVTFADGTPL TADDIVASLD LHAKKGSTSA FAYAYANVDK IEAGGPAEVT
ITLKQPDASF AWTPSPGTLL VTSRKFIEAT GQDIGTPTGK ILGTGPYRVT EFAPDSHVTL
ERNDAWWGGK APYRQIRLDF IPEESTRLLA MRGGSVDVAL NVPAEQIDQW KAVSGVELKT
ASDRSLVTLA FNTAKKPWND IHVRKAVAHA VDRDGIVRSV LRGHGQVATT VTDPAQWGGV
LGEAEVKSLY ESIPQYGFDL AKARAELALS SVPGGFSDVL TYPGSGPQLG RAALTLAQNL
KTIGITLEVK EVPLEQWIAE LGKHASGIYL GWYFATTGDP SEYIQQLLNG AFVGENGSNI
AEYADDEVTG LLDQAKKGTD EAARGKLLGE ALVKAAADVP YQPLWWGEAA TAFGPGVGAA
DFGPYFFVGP WAAQLSTRS