Gene Sros_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0729 
Symbol 
ID8663999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp743169 
End bp743741 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content67% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003336491 
Protein GI271962295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATTC CCCGCGAAGT CACCGAGGTC GATGACGCGG CTCTCATTGA GAGGTCGCTG 
CACGAGCCCG AGATCTTCGC CATCCTGTTC GACCGGCATG CGCCACTCCT GCACCGCTAC
GTGACCAGGC GACTGGGACC CAGCGAGGCG GAGGACGTCG TGGCCGACAC CTTTCTGGCC
GCCTTCCAGC GCCGGGGCGA TTATGACCGG GGCCGCTCCG ACGCCCGCCC GTGGCTGTAC
GGCATCGCCT CCAACGTGAT CGGCAAGCGG CGGCGCACCG AGACGAACCT CTACCGCGCA
TACATCCGCA GCGGCTTGCA TCCAGCGGAG ATATCGGGTC TCCGGGTAGA GGACGGGATC
AACACCCTGG CCGTCAACCG ACCGCTGGCA CGGGCCCTGC TGGGGCTCAC ACGAGCTGAT
CGCGACGTGC TGCTGCTCGT CGCCTGGGCC GGATTGAGCT ACCAGGAGGT CGCCGACGCG
CTCGCCATCC CCCTGGGCAC CGTCGCCTCG CGACTCAATC GAGCCCGTCT CCAGATCCGT
CACGCCCTGA ACCAGGAAGA ACGAGGAGAA TGA
 
Protein sequence
MTIPREVTEV DDAALIERSL HEPEIFAILF DRHAPLLHRY VTRRLGPSEA EDVVADTFLA 
AFQRRGDYDR GRSDARPWLY GIASNVIGKR RRTETNLYRA YIRSGLHPAE ISGLRVEDGI
NTLAVNRPLA RALLGLTRAD RDVLLLVAWA GLSYQEVADA LAIPLGTVAS RLNRARLQIR
HALNQEERGE