| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_0658 |
|---|
| Symbol | |
|---|
| ID | 8663927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 669161 |
|---|
| End bp | 669826 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | xylanase/chitin deacetylase-like protein |
|---|
| Protein accession | YP_003336424 |
|---|
| Protein GI | 271962228 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATTCGG TCGTCAACCT CACGGTGCAC GGCATCGGTC CGACCAGCCG CGAGCTCGAC
CCGGGTGAGG ACACGACCTG GGTCAGCGTC GAGCAGTTCG AGCAGGTCCT CGACGCGGCG
GTGGGCCGCC CGGACGTCCG CATCACCTTC GACGACGGCA ACGCCTCCGA TGTGGAGATC
GCCCTTCCCC GGCTGCTCGA CCGCGGTCTC ACCGCTGAGT TCTTCGTGCT GGCCGGGCTC
CTCGGCGAGC CGGGCCGGCT GGACGCGGAC GGGGTGCGGG AGCTGGTCGC GGCGGGCATG
CGGGTCGGCT CACACGGCTG GGCGCATCGC GACTGGCGGC GGCTGGACGG GGAGCAGGCG
GAAGAGGAGA TCGCCGACGC CAACCGGCTC CTCGGCGAGC TCACCGGGCG GCGGGTGTCG
AGGGTGGCCA TCCCGTTCGG CTCCTATGAC AGGCGCGTGC TCGGCAGGCT GCGGCGGGCG
GCGGTGACGC GCGCCTACAC CAGCGACGGC GGCCGCGCCC GGCCCGGCTC CTGGCTCCAG
CCGCGCAACA GCCTGCGCCA CGACATCGAC GGCACGTGGG CCCCCCGGAT CATCGACGGG
ACGCCGCCGC TGCCGCTGCG CGTCCGCAGG GTCGCCGCGC GGGCGTTCAA GCGTGCCCGC
GGGTGA
|
|---|
| Protein sequence | MDSVVNLTVH GIGPTSRELD PGEDTTWVSV EQFEQVLDAA VGRPDVRITF DDGNASDVEI
ALPRLLDRGL TAEFFVLAGL LGEPGRLDAD GVRELVAAGM RVGSHGWAHR DWRRLDGEQA
EEEIADANRL LGELTGRRVS RVAIPFGSYD RRVLGRLRRA AVTRAYTSDG GRARPGSWLQ
PRNSLRHDID GTWAPRIIDG TPPLPLRVRR VAARAFKRAR G
|
|---|
| |