Gene Sros_0634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0634 
Symbol 
ID8663903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp642787 
End bp643437 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content73% 
IMG OID 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_003336400 
Protein GI271962204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCC TCAGCATCGA CGGAACCTGG TGTCATACGC CGCGTATCCA CGCTGATCCC 
CGTGGATCGT TCCTGGAGAG CTACCGTGCC GCCGACCTGG AGGAATCCGT CGGCCACCGG
CTGGACCTCG CCCAGGTCAA CTGCTCGGTC TCCAGACGGG GCGTCCTGCG CGGCATCCAC
TTCGCCGACG TGCCGCCCGG CCAGGCCAAG TACGTCACGT GCGTCTCCGG GGCCGTCCTC
GACGTCGTCG TGGACATCCG TGTCGGCTCG CCCACCTTCG GCCGCTGGGA GACCGTCCTG
CTGGACGACG AGTCCCGGCG CGGACTCTAC GTCGCCGAGG GGCTGGGCCA CGGGTTCCTG
ACGCTCAGCG AGCAGGCCAC GGTCGTCTAC CTGTGCTCGC GGCCCTTCAC CCCCGGGCGC
GAGCACGGGA TCCACCCGCT CGACCCGGCC CTGGGGATCG ACTGGCCGGC CGGCGTGGAG
CCGCTCCTGT CGGACAAGGA CGCCGCCGCC CCCACCCTCA AGGAGGCCCT GGACGCGGGC
CTGCTGCCGG ACCACGGCGC ATGCGCGGCC TACTACGCCG GCCTCGCCGC GGCCGGCCGC
GACCGGGACC CCGCCACCCG TGGCCCGGAC CTCGCCGCGC CTAGTCTCTG A
 
Protein sequence
MEPLSIDGTW CHTPRIHADP RGSFLESYRA ADLEESVGHR LDLAQVNCSV SRRGVLRGIH 
FADVPPGQAK YVTCVSGAVL DVVVDIRVGS PTFGRWETVL LDDESRRGLY VAEGLGHGFL
TLSEQATVVY LCSRPFTPGR EHGIHPLDPA LGIDWPAGVE PLLSDKDAAA PTLKEALDAG
LLPDHGACAA YYAGLAAAGR DRDPATRGPD LAAPSL