Gene Sros_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0625 
Symbol 
ID8663894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp633032 
End bp635083 
Gene Length2052 bp 
Protein Length683 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336391 
Protein GI271962195 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGCC GCAATCACTC GATCAGGGTC AAAATTTTCA CCCTCCTTCT AGTGCCGATT 
GTCTCCCTTG TGGCGATTTG GGCATTTGCG GCGACCCTCA CCTTCCAGAG CGGCCAGGAG
CTGCTCCGGG CCAGCGAGGG ATACGAGCGC GGCGTCCTCC CCACCCGGAC GGTGACCACC
GCGATCCAGC ACGAACGGCT GCTGTCCCTG TCCGTCCTGG GCGGCTCGAC GATCGCGCGC
ACCGAACTCG ACGCCCAGCG GATCCGGACG AACACCGCCC GAACGGAGCT GGAGCGGCTG
GCCCCCGCCC TCCGCGAGGG CACGTCCCCG GCCGTGCGGG ACCGCCTGGT CAAGCTCCTG
AGCTCGATGG AACGGCTCAC CGAGATCCGG AGCGAGGTGG ACACCCGCAC CGCCGGCCAG
ACCCAGACCC TCGACGCCTA CAACGCGATC GTCGGGGCCG CCTTCGAGGT CTACGACAAG
ATCCGGGTGT CCTCGGACAT CGACATGAAC GACCAGACCC GCGCCGTCGT CCTGATGGGC
CGGAGCCGGG AGATGCTCAG CCAGCAGGCC GCGCTGATCG CCGGCGCCGT GGCCGAGGGC
AGCATGAGCA CCGACGAGCG CGCCAAGTTC AACGACCTGG CCATCGGCCG CAAGCTGCTC
TACTCCATGG GCTTCAACCA GTTCGACGAG GAGTTCCAGG AGCTCTACCG GAGCCTGCAG
AACTCCGGCG CCTACGCCTC GTTCGAGCGG ATAGAGAAGG CCGTCACCAC GGCGGGCAAA
CCCGCCCCCT CCTGGGCGAC GGTCGCGGCG AAGGTCTCCG ACACCTTCGA CGACCTCGGC
GGGGAGGTCA GCAAGGGCAT CAGCGACCGG TCCGGGCCGC TGGCCACCGG CATCCTGCTC
CAGATCGGCG TCGCCGCCGG GCTCGGCCTG GTCGCCGTCG CGCTGTCCAT CTTCGTCTCG
GTGCGGTTCG GCCGCCGGAT AGGCACCGAG CTCGTCGGCC TCCAGCAGGC GGCTCTCGAC
CTGGCCCACA GCCGGCTGCC GGACGTCGTC GAGCGGCTCC GCCGGGGCGA GGACGTCTGC
TCCGAGGCCC AGGAGCTGAA CCACGGCACC ACCACCGAGA TCGTGAACGT CGGCAAGGCG
TTCTCCTCCG TCCAGCGGAC CGCCGTCGAG GCCGCCGCCG GCCAGGCCCA GATGCGCAAG
AGCGTCAACA AGGTCTTCGT GAACCTGGCC AGGCGCAGCC AGTCGCTCCT GCACCGGCAG
CTCTCCATGC TGGAGGCGAT GGAACAGCGG GCCAGCGACC CGGAGACCCT CGACGACCTG
TTCGGCCTGG ACCACCTGAC CACCCGCATG CGCCGCCACT CCGAAGGCCT GATCATCCTG
TCCGGCGCGG TCCCCGGCCG GGGCTGGCGG ACGCCGGTCA CGATCTACGA CGTGGTCCGC
GCCGCCGTCG AGGAGGTCGA GGACTACCAG CGCGTGACGG TGAACGTGCC ACAGGGCCCC
TCGGTGGTCG GCACGGTCGT GACCGACGTG ATCCACCTCG TGGCCGAGCT GGTGGAGAAC
GCCGCCATCT TCTCGCCCCC GCACACCATG GTGAGCATCC AGGGCGAGAT GGTGGCCAGG
GGCTACGCCA TCGAGGTGGA GGATCGCGGG CTCGGCATCA CCCCGGACGA GATGGCCCAG
CTCAACCGGC GGCTGGCCGA CCCGCCGGAG TTCGACCTGG CCGACAGCGA CCGGCTCGGC
CTGTTCGTCG TGACGCAGCT CGCCGCCCGG CACGGCATCC GCGTCTCGCT GCGCCCCTCC
CCCTTCGGCG GCACCACGGC GATCGTGCTC CTGCCCGGCG AGCTGGTGGT CGCGGTGCCC
GACCGCCAGG CCGCCTACTC GGCCGAGGTC GAGTGGGTCA CCACCGGCAG CGGTCTGCCC
AAGCGCGTAC GGCAGGCCGT ACCCGAACGG CGGACCGCGC CGGCTGAGGC GTCGGAGCGG
GCCCCGAGCA GTGTGATGAC GTCGTTCCGC GATGGATGGC GCCGTGCGGA ACAGGAAGGC
GGGGCGGAAT GA
 
Protein sequence
MVGRNHSIRV KIFTLLLVPI VSLVAIWAFA ATLTFQSGQE LLRASEGYER GVLPTRTVTT 
AIQHERLLSL SVLGGSTIAR TELDAQRIRT NTARTELERL APALREGTSP AVRDRLVKLL
SSMERLTEIR SEVDTRTAGQ TQTLDAYNAI VGAAFEVYDK IRVSSDIDMN DQTRAVVLMG
RSREMLSQQA ALIAGAVAEG SMSTDERAKF NDLAIGRKLL YSMGFNQFDE EFQELYRSLQ
NSGAYASFER IEKAVTTAGK PAPSWATVAA KVSDTFDDLG GEVSKGISDR SGPLATGILL
QIGVAAGLGL VAVALSIFVS VRFGRRIGTE LVGLQQAALD LAHSRLPDVV ERLRRGEDVC
SEAQELNHGT TTEIVNVGKA FSSVQRTAVE AAAGQAQMRK SVNKVFVNLA RRSQSLLHRQ
LSMLEAMEQR ASDPETLDDL FGLDHLTTRM RRHSEGLIIL SGAVPGRGWR TPVTIYDVVR
AAVEEVEDYQ RVTVNVPQGP SVVGTVVTDV IHLVAELVEN AAIFSPPHTM VSIQGEMVAR
GYAIEVEDRG LGITPDEMAQ LNRRLADPPE FDLADSDRLG LFVVTQLAAR HGIRVSLRPS
PFGGTTAIVL LPGELVVAVP DRQAAYSAEV EWVTTGSGLP KRVRQAVPER RTAPAEASER
APSSVMTSFR DGWRRAEQEG GAE