Gene Sros_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0616 
Symbol 
ID8663885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp626118 
End bp627518 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content68% 
IMG OID 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_003336382 
Protein GI271962186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC ACTATGACGT GGTCGTCCTC GGTGCGGGTC CGGGCGGATA CGTGGCCGCC 
ATCCGAGCAG CCCAGCTGGG ACTCAGCGTG GCGGTCGTCG AGGAACGTTA CTGGGGTGGT
GTCTGCCTCA ACGTGGGATG CATCCCCTCC AAGGCGCTGC TGCGCAACGC GGAGCTGGCG
CACATCTTCA CGCACGAGGC CAAGACGTAC GGCATCCGGG TCGAAGGACA GGTCACCTTC
GACTACGGCG AGGCCTTCAA GCGCAGCCGC AAGGTCGCCG ACGGGCGCGT CAAGGGCGTT
CACTACCTGA TGAAGAAGAA CGGCATCACC GAATACGACG GCCGCGGCAC CTTCGTCGAC
GCCAACACGC TTCAGGTGGC CGGCCGGGAC GGCGGCGCGG AGACGGTGAC GTTCGACCAC
TGCATCATCG CGACGGGCGC GACCACGAAG CTGCTGCCGG GGACATCGGT GACGGAGCGG
GTCGTGACGT ACGAGGAGCA GATCCTGAGT GACAAGCTCC CCGAGAGCAT CGTCATCGCG
GGTGCGGGCG CGATCGGCGT CGAGTTCGCC TACGTGCTGC ACAACTACGG CGTCAAGGTG
ACGATCGTGG AGTTCCTCGA CCGCGTCGTC CCCCTGGAGG ACGAGGAGGT CTCGGCGGAG
CTCGCGCGGC GCTACAAGCG GCTCGGCATC GAGGTGCTGA CCTCGACCCG GGTGGAGTCG
ATCGACGACT CCGGCGAGCA GGTGCGGGTG ACGGTCTCGC GCGAGGGGCA GCAGCAGGTC
ATCGAGGCCG ACAAGGTGAT GCAGGCGATC GGCTTCCAGC CCCGGGTGGA GGGCTACGGG
CTGGAGCGCA CCGGGGTCGC CCTGACCGAG CGCGGCGCCA TCGACATCGA CGGCCGGGGC
CGTACGAGCG TGCCGCACAT CTTCGCCATC GGCGACGTGA CCGCCAAGCT GATGCTCGCC
CACGCCGCCG AGTCCATGGG GATCATCGCG GCGGAGACCA TCGCCGACGA GGAGACGATG
GAGCTGGACT ACGTGATGAT CCCGCGGGCG ACGTACTGCC AGCCCCAGAT CGCCAGCTTC
GGCTTCACCG AGGCGCAGGC CCGCGAGCTC GGCTACGACG TGAAGGTGGC CAAGTTCCCG
TTCACCGCCA ACGGCAAGGC CCACGGCCTG GGCGACGTCA CCGGATTCGT CAAGCTCCTC
AGCGACGGCG AGCACGGGGA GCTGATCGGC GCTCATCTGA TCGGCCCGGA GGTCACCGAG
CTGCTGCCCG AGCTGACGCT GGCCCAGCAG TGGGATCTGA CGGTCCACGA GGTGGCGCGT
AACGTGCATG CCCACCCCAC GCTCGGGGAG GCGGTCAAGG AGGCGGTTCA CGGCCTGGCC
GGGCACATGA TCAACATGTG A
 
Protein sequence
MSTHYDVVVL GAGPGGYVAA IRAAQLGLSV AVVEERYWGG VCLNVGCIPS KALLRNAELA 
HIFTHEAKTY GIRVEGQVTF DYGEAFKRSR KVADGRVKGV HYLMKKNGIT EYDGRGTFVD
ANTLQVAGRD GGAETVTFDH CIIATGATTK LLPGTSVTER VVTYEEQILS DKLPESIVIA
GAGAIGVEFA YVLHNYGVKV TIVEFLDRVV PLEDEEVSAE LARRYKRLGI EVLTSTRVES
IDDSGEQVRV TVSREGQQQV IEADKVMQAI GFQPRVEGYG LERTGVALTE RGAIDIDGRG
RTSVPHIFAI GDVTAKLMLA HAAESMGIIA AETIADEETM ELDYVMIPRA TYCQPQIASF
GFTEAQAREL GYDVKVAKFP FTANGKAHGL GDVTGFVKLL SDGEHGELIG AHLIGPEVTE
LLPELTLAQQ WDLTVHEVAR NVHAHPTLGE AVKEAVHGLA GHMINM