Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_0606 |
Symbol | |
ID | 8663875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 615468 |
End bp | 616784 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | serine-type D-Ala-D-Ala carboxypeptidase |
Protein accession | YP_003336372 |
Protein GI | 271962176 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGAGCCG GTTTCGGGGC GTCGCGTACC GCCCGCCGCA TGGCTCTGCT GGCACCGGGT GCAGCCCTGC TGATCGCGAG CTGCACCTTG CCCTCAGGGG CGAGTCTCAC GGCCCTCTCC GACGCGTCGG CCACACCTGC GCCGACGGCG AGCGCCTCCG GCCTCACTCC GCCGGCGCTG AAGCCCATCG ATCCGGCCGT GTTCCAGTCC GCCGTCGAGC GTGCGGCGAA GAAGCTCATG GTTCCCGGCG CGTTGGTCCT GCTCCGCACC CCGCAGGGAA CCTTCCGGGC GACCGTCGGC ACAACCGAGC TGGGGACGGC CAGACCGCCC ACCACGGGCG ACCACTTCCG GATCGCCTCC AACACCAAGA CCATGACCTC GGCGCTGATC ATGCTCTCCG CCCAGGACGG CAGACTCCGG CTGAGCGACC CGGTGTCCGC CTACGTTCCC GGAGTGCCCA ACGGCGAACA CATCACCATC GCCGAGCTGC TGAAAATGCG CAGCGGACTC TACAACTACA CCAACGCACC CGAACTCGCG GCGACCATGG ACGCCGACCC GGGCAAGGCC GTGACGCCGC AGGCGATGCT GGACATCGCG TTCCGGCGCC CGCCGAACTT CGCACCCGAC GCGTCCTACG AGTACAGCAA CACCGACTAC GCGCTGCTGG GCCTCGTCGC CGAGAAGGCG GGCGGTCGCC CGCTGGCCCA GCAGTTCCGG GACCGGCTGT TCGCCCCGCT CGGACTGGCG GGGACCTCGC TGCCCGCCGC CGACGACCTG TCCCTCCCCA CCCCCTATTC ACACGGCTAC ATGTACGGCG GATCGGCCTA CGCGCTGGTC GACCGGCCCT ACCCCGCCGA CGTGCAGGCG GCGGCCCGGT CCGGAAAGCT CCGGCCGATG GACTACACCC ACCAGAACCC CTCCTACGCC ACCGCCGCCG GAGGCGTCAT CTCCACCGCC GACGACCTGG CCACCTGGAT CCGGGCTCTC GTGACGGGCA AGGTCCTCAA TCCCGCGTTC CAGCAGCAAT GGCTCCACAG CCCGCAAGCC GAGGACCCGG CCGCTCCCGG CGGGAAGAAA TACGGGTACG GCATCGCCTA CCAGCGCTTC GGCCCGAACG CCTCGATGTA CTACCACGGC GGTGAACTGC CCGGCTTCAA CTCCTTCATC GGCCACGACC CGGACAACGA GGTCACGCTC GTCATCTGGA CGAACCTGAC CCTGTCGCCC GACGGCAAAA CCACGGCCCA AGCCCTGCTG CCCACCGCCC TCAACCAGGT CTACGCCGGC CTCTCCCTCC CCACCGGCAC CGACTAG
|
Protein sequence | MGAGFGASRT ARRMALLAPG AALLIASCTL PSGASLTALS DASATPAPTA SASGLTPPAL KPIDPAVFQS AVERAAKKLM VPGALVLLRT PQGTFRATVG TTELGTARPP TTGDHFRIAS NTKTMTSALI MLSAQDGRLR LSDPVSAYVP GVPNGEHITI AELLKMRSGL YNYTNAPELA ATMDADPGKA VTPQAMLDIA FRRPPNFAPD ASYEYSNTDY ALLGLVAEKA GGRPLAQQFR DRLFAPLGLA GTSLPAADDL SLPTPYSHGY MYGGSAYALV DRPYPADVQA AARSGKLRPM DYTHQNPSYA TAAGGVISTA DDLATWIRAL VTGKVLNPAF QQQWLHSPQA EDPAAPGGKK YGYGIAYQRF GPNASMYYHG GELPGFNSFI GHDPDNEVTL VIWTNLTLSP DGKTTAQALL PTALNQVYAG LSLPTGTD
|
| |