| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_0568 |
|---|
| Symbol | |
|---|
| ID | 8663837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 577935 |
|---|
| End bp | 578870 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | DMT superfamily drug/metabolite efflux pump |
|---|
| Protein accession | YP_003336335 |
|---|
| Protein GI | 271962139 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0349448 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAACCC GGCATCTCTT CCTGGCCATC GGCCTCGCCG CCGTCTGGGG CTTCAACTTC
GTGGTCATGG AAGTGGGACT CAGGCACTTC CCGCCACTGC TCTACGTGGC GCTGCGCTTC
ACCCTGGCCG CCTTCCCCGC CGTGCTGTTC ATCGGCGGTC CCCGGGTGCC CTGGCGATGG
GTCCTCACCG CCGGGGCCAC GCTCGGCGTC ACGCAGTACG GCCTGCTCCT GCTGGGCATG
CGGGCCGGCA TGCCCGCCGG TCTCACCTCC CTCGTCGTCC AGGTCCAGGC GGTCTTCACC
GTGATCCTCG CGGTGACACT GCTCAAGGAG CGGATCACCA CCCGCCGGGT CGCCGGGATG
GGCATCGCGT TCGCGGGACT GGCCCTGATC GCGCTGGACC TGGGCAACGG CGGCCCGATC
GGCGCGTTCG TCCTGGTCGT CGGCGCCGCC CTCGGCTGGG GCGCGGGCAA CATCGCCGTC
AGGAAGGCCG CGCCCCCGGA CTCGCTGCGC TTCATGGTGT GGCTGAGCGC GGTGGCCGCC
GTTCCCATGC TGGGCCTGTC CCTGCTGGTG GAGGGGGTCC CCCGGCTGGA GTTCTCGACG
GAGGGCACCC TGTCGGTGCT CTACGTCGCG CTGATCTCCA CCCTGGGCGG CTTCGGCGTG
TGGGGCTTCC TGCTGAAGCG GTACGACGCC TCGGTGGTCG CCCCCTACAG CCTGCTCGTC
CCCGTCTTCG GCATGTCCTC CGCCGCCCTG TTCACCGGAG AGCCCGTCTC CCCGGTCAAA
CTCGCCGCCG CCGCCCTCAT AATCTCCGGC GTCCTGTTCG CCGGCACCCG CCCCGCGAGC
CGTACGGCCT CCGCCGGGAA GACGTCCCGG CGGAGCCCGG AGCCCGGACC GCCTGATCCC
TCCGGCTCGC ACCGGGAGGC CTCGACCCGC GCCTAG
|
|---|
| Protein sequence | MRTRHLFLAI GLAAVWGFNF VVMEVGLRHF PPLLYVALRF TLAAFPAVLF IGGPRVPWRW
VLTAGATLGV TQYGLLLLGM RAGMPAGLTS LVVQVQAVFT VILAVTLLKE RITTRRVAGM
GIAFAGLALI ALDLGNGGPI GAFVLVVGAA LGWGAGNIAV RKAAPPDSLR FMVWLSAVAA
VPMLGLSLLV EGVPRLEFST EGTLSVLYVA LISTLGGFGV WGFLLKRYDA SVVAPYSLLV
PVFGMSSAAL FTGEPVSPVK LAAAALIISG VLFAGTRPAS RTASAGKTSR RSPEPGPPDP
SGSHREASTR A
|
|---|
| |