Gene Sros_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0564 
Symbol 
ID8663833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp571599 
End bp573062 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336331 
Protein GI271962135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.824593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCG GAGACAACGA ACGGCGAGAA CTCGAGGAAG CCCTGCACGT CGACGAGATC 
GGCATCAGAC CCGTACCGCC CGAAGGACGG GACGCCACGG CGCTGCAGCA GTTCTGGATA
TGGGCGGGCG CGAACCTCGC ACCGATCAGC TGGATCGTCG GGACCGTGGG CATAGCTCTG
GGGCTGAGCC TGCTCGAGAC CATCCTCATC GCCGTCATCG GACAGGCCGT CGGAGCCCTC
ATCTTCGGCC TGTTCGCGCT GATGGGGCAC CGCACCGGCG TCAACCAGAT GGTCCTCGCG
CGGGCGACGT TCGGCCGCCG CGGCGCCTAT CTGCCCGCGC TGCTGCAGAC GCTCATGGCC
ACGGGATGGA TCGGCATCAA CACCTACGTC GTGCTGGACC TCTGTCTCGG CATCGCCCAC
CAGATGGGCC TGCAGCCCGG TGACACCGTC AAGTACGGGC TGGCGGTCGC GATCATGATC
GTCCAGGTCG TCATCGGCGT CCTGGGCTTC TACGCGATCC GCACGTTCGA GAAGTACACC
GTCCCGGTCG TGACCGTGGT CATGGTGATC ATGACCGTGG TGGTGCTGAC CAGGCTCGAG
GACATCAGCT GGACCGAATC GTCGCTGGCC GGCGGCGAGC GGTTCACCGC CGCCACCCAG
CTGCTGACCG CGGTCGGCGT CGGATGGGGG ATGGGGTGGA TCACGTGGGC CTCGGACTAC
AGCAGGTTCA CCCGGCCCGG CGTCTCTCCC AGGCGCCTGT ACGCCGCCTC GGCGATGGGC
ATCTTCGCTC CCCTGTCCTG GCTGTCGATT CTCGGAGCGC TCTCCGGTAC GGCCTCGCAG
GCGGGCGATC CGGCCGAGAT CGTCGCCTCC CTCTTCGGCA TCATGACCGT TCCCGTCCTG
TTCGTGATCC TGCACGGGCC GGTGGGCACC AACATCGTGA ACATCTACAC CGCCTCGCTC
GGACTTCTCT CGCTCGACAT GAAGCTCAAG CGCACCACCG CCAGCCTGCT CACCGGCGTG
GTCGGTTTCC TGCCCCTGTT CGTCTTCATC GAGTCCGAGA GCTTCGCCGC CGGTTTCACC
AACTTCATGT CGTCGGTGGT CATATGGCTC AGCCCCTGGG CCGGTGTGAC GCTGGTCGAC
TGGTACGTCA TACGCAGGCG GCAGGTGGAG TGCGACGCGC TCTACGCCGA CCCGCGCACC
TCCCGGTACG GCGACGTCAA CATGCGAGCG GTCTCGGCGT TCCTCGCCGG CCTCGCCTCC
GCCTGGGCGT TCCAGTACGG TGCCATCGAA GCCTTCCAGG GCCCCGTCGC CCGCGCGATG
GGGAACGTGG ATCTCTCCTG GGCGGCCGGC ATGGGCGTCA GCGCCGTCCT CTACTTCCTG
CTGACACGGG GGCGGGCGGA CGTCGCGGCG GCACCCCCTG CCCGCCGGGT CGGATCGGCG
GGCGAAAACG TGGTGTCTTC GTGA
 
Protein sequence
MSAGDNERRE LEEALHVDEI GIRPVPPEGR DATALQQFWI WAGANLAPIS WIVGTVGIAL 
GLSLLETILI AVIGQAVGAL IFGLFALMGH RTGVNQMVLA RATFGRRGAY LPALLQTLMA
TGWIGINTYV VLDLCLGIAH QMGLQPGDTV KYGLAVAIMI VQVVIGVLGF YAIRTFEKYT
VPVVTVVMVI MTVVVLTRLE DISWTESSLA GGERFTAATQ LLTAVGVGWG MGWITWASDY
SRFTRPGVSP RRLYAASAMG IFAPLSWLSI LGALSGTASQ AGDPAEIVAS LFGIMTVPVL
FVILHGPVGT NIVNIYTASL GLLSLDMKLK RTTASLLTGV VGFLPLFVFI ESESFAAGFT
NFMSSVVIWL SPWAGVTLVD WYVIRRRQVE CDALYADPRT SRYGDVNMRA VSAFLAGLAS
AWAFQYGAIE AFQGPVARAM GNVDLSWAAG MGVSAVLYFL LTRGRADVAA APPARRVGSA
GENVVSS