Gene Sros_0560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0560 
Symbol 
ID8663829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp568445 
End bp569290 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content66% 
IMG OID 
Product5-carboxymethyl-2-hydroxymuconateDelta- isomerase 
Protein accessionYP_003336327 
Protein GI271962131 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTTA CAACCTTCCA GACTCCTCAG GGTGCCACCA CCTACGGCGC CGTCACCGAC 
CGTGGCCTGG TCGACCTTGG AGCGCGTCTC GGCACCCGCT ATCCCGATCT CAAGTCACTC
ATCGGCGACG ACGCGACGGT GGTCGCGAGC GAGCATCTGG ACAAGGTGGA CTACGCGGCG
TCCGACGTGA CCTGGCTCCC GGTGATCCCC AATCCAAACA AGATCATCTG TGTCGGCCTG
AACTACGAAG ATCACCGAGC CGAGACGGGA AACTCGGTGA GCGCGCAGCC GGCGGTGTTC
CTGCGTGTCC CCGAGTCGCA GACCGGCCAC GACAGCCCGC TGCTGCGCCC GCGCGAGAGC
GACACGCTCG ACTACGAGGC CGAGGTCGCC GTCGTCATCG GACGCTCCGG CCGCCGGATC
ACCCCCGATA CGGCCTGGCG CCACGTAGCC GGGCTGAGCT GCTACAACGA CGGCTCCGTG
CGCGAGTTCC AGCGTCACAC GCACCAGTAC ACTCCGGGTA AGAACTTCCC ACGGACCGGC
GCCTTCGGGC CCTGGATGGT CACCATGGAC GAGATACCCG CCGACAGCGC CCTCACCCTG
TCCTGCCGCC TCAACGGCAA GATCATGCAG CACGCGACGA CCAGCGAGAT GATCTTCTCG
ATCCCGCGGA TCATCTCCTA CGTGTCGACG TTCACCACGC TCGCGCCGGG AGACGTCATC
GCCACCGGCA CTCCGGGGGG CGTCGGAGCG CGCAGGTCAC CGCAGGTCTT CATGCGGCCG
GGCGACACCG TCGAGGTCGA GATCGACAAG ATCGGTGTGC TGCGCAACAC GATCTCCGAT
GACTGA
 
Protein sequence
MRLTTFQTPQ GATTYGAVTD RGLVDLGARL GTRYPDLKSL IGDDATVVAS EHLDKVDYAA 
SDVTWLPVIP NPNKIICVGL NYEDHRAETG NSVSAQPAVF LRVPESQTGH DSPLLRPRES
DTLDYEAEVA VVIGRSGRRI TPDTAWRHVA GLSCYNDGSV REFQRHTHQY TPGKNFPRTG
AFGPWMVTMD EIPADSALTL SCRLNGKIMQ HATTSEMIFS IPRIISYVST FTTLAPGDVI
ATGTPGGVGA RRSPQVFMRP GDTVEVEIDK IGVLRNTISD D