Gene Sros_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0556 
Symbol 
ID8663825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp564151 
End bp565464 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content73% 
IMG OID 
Productglutamate-1-semialdehyde 2,1-aminomutase 
Protein accessionYP_003336323 
Protein GI271962127 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0652148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCC TGGAAGGCGT GAGCCGTACT GAGAACTCCG AGGACCTGTT CGCCCGCGCA 
CGTGAGATCG TCCCGGGAGG TGTCAACTCT CCGGTCCGCG CCTTCGGGGC CGTCGGTGGG
ACCCCCCGTT TCATGGCCTC CGGCCAGGGG CCCTACATCA CCGACGTGGA CGGCAACCGC
TACGTGGACC TGGTCTGCTC CTGGGGGCCG ATGATCCTCG GGCACCGTCA CCCGGCCGTG
GTCGAGGCGC TGCAGAACGC CCTGGCGGCG GGCACCTCGT TCGGTACGGC GACGCCCGGC
GAGGTCGAGC TCGCCGAGGA GATCGTCGCC CGGGTGGAGC CGGTGGAGAA GGTCCGCCTG
GTCAGCTCGG GCACCGAGGC CACCATGTCC GCGGTACGGC TGGCCCGCGG CTTCACCGGC
CGCTCCAAGG TCGTCAAGTT CGCGGGCTGC TACCACGGCC ACGTGGACGC CCTGCTCGCC
TCGGCGGGGT CCGGCCTGGT CACCTTCGGC CTGCCCGACA CCCCCGGCGT GACCGGCGCC
TCGGCCGCCG ACACGGTGGT GCTGCCCTAC AACTCGGTCG AGGCCGTGAC GGAGGCCTTC
CGGGCCTTCG GCGCCGAGAT CGCGTGTGTG ATCACCGAGG CCTGCCCGGC CAACATGGGC
GTCGTCCCGC CGCTGGACGG GTTCAACGCC ACGCTGCGCG AGCTCTGCAC CGCGCACGGC
GCCCTGCTGA TCATCGACGA GGTGCTCACC GGTTTCCGGG TGTCGGAGGC CGGATGGTAC
GGGCTGGACC CGGTGGACGC CGACCTGATG ACCTTCGGCA AGGTCATGGG CGGCGGCCTG
CCCGCCGCCG CGTTCGGCGG CCGCGCCGAC GTGATGGCCC ACCTCGCTCC GGAAGGGCCG
GTCTACCAGG CCGGCACCCT GTCCGGTAAT CCGCTGGCCT GCGCCGCCGG GCTGGCCACC
CTGCGCGCCT GCGACGACGA GGTCTACGAC CGGGTCGACG CCTCCGCCCT GGTCATCGGC
CGCGCCGCCG CCGACGCCCT GGCCGCCGCC GGGGTGCCGC ACCGCCTGCA GCGCGCGGGC
AGCCTGTTCT CCGTCTTCTT CACCGAGGAC CAGGTCACCG ACTTCGACGG GGCCCAGAAG
CAGAACACCG CCGCCTACCG GGCCTTCTTC CACGCCATGC TCGACCAGGG CGTCTACCTG
CCCCCGTCGG CCTACGAGGC CTGGTTCCTG TCGGCCGCCC ACGACGACGA GGCCCTGTCC
CGCGTGGCCG ACGCGCTGCC GGTCGCCGCC AAGGCCGCCG CCCAGGCCTC CTAG
 
Protein sequence
MTTLEGVSRT ENSEDLFARA REIVPGGVNS PVRAFGAVGG TPRFMASGQG PYITDVDGNR 
YVDLVCSWGP MILGHRHPAV VEALQNALAA GTSFGTATPG EVELAEEIVA RVEPVEKVRL
VSSGTEATMS AVRLARGFTG RSKVVKFAGC YHGHVDALLA SAGSGLVTFG LPDTPGVTGA
SAADTVVLPY NSVEAVTEAF RAFGAEIACV ITEACPANMG VVPPLDGFNA TLRELCTAHG
ALLIIDEVLT GFRVSEAGWY GLDPVDADLM TFGKVMGGGL PAAAFGGRAD VMAHLAPEGP
VYQAGTLSGN PLACAAGLAT LRACDDEVYD RVDASALVIG RAAADALAAA GVPHRLQRAG
SLFSVFFTED QVTDFDGAQK QNTAAYRAFF HAMLDQGVYL PPSAYEAWFL SAAHDDEALS
RVADALPVAA KAAAQAS