Gene Sros_0549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0549 
Symbol 
ID8663818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp554802 
End bp555722 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content71% 
IMG OID 
ProductHydroxymethylbilane synthase 
Protein accessionYP_003336316 
Protein GI271962120 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.503516 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.484278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAGCG TCTCCTCTCC GCTCAGGCTG GGCACGAGGC GGAGCCTGAT GGCCACGACC 
CAGTCGGGGC TGGTCGCCGC ACGGCTGACC GAGCTGACCG GCCGGGCCGT CGAGCTCGTC
GGCGTCACCA CCTTCGGCGA CGTCACCAAG GCCAATCTCA CCCAGCTCGG CGGGACGGGC
GTCTTCGTCA GCGCGCTGCG CGACAAGCTG ATCGACGGCG AGATCGACTT CGCGGTCCAC
TCGCTGAAGG ACCTCCCCAC CACGCAGGAC CCGCGCGTGG TCATCGCGGC GATCCCGCCG
CGTGACGACC CCAGGGACGC GCTGGTGAGC ACGGCGAAGC TGGCCGACCT GCCGGCCGGC
TCGAAGGTCG GCACCGGGTC TCCCCGCAGG ATCGCCCAGC TCAGGGTGCT CCGCCCCGAC
CTCGAATACG TCCCGATCCG CGGCAACGCC GACACCCGGA TCGGCAAGGT CACCTCCGGT
GAGCTGCAGG GTGTCGTGCT GGCCGCCGCC GGGCTCGGAC GGCTGGGCCG TGAGGCCGAG
ATCTCCCAGG TCTTCGAGGT GGAGGAGATG CTCCCGGCCC CCGGGCAGGG AGCACTGGCC
GTGGAGTGCC GGGCCGACCG GACCGACCTC ATCGAGTTCC TGAGTGTGCT CGACGACGCC
CGGACCCGCG CCGCGGTGAC CGCCGAGCGC GCGGTGCTCA ACGCCCTGGA AGCGGGGTGC
GCGGCCCCGG TTGGTGCGTA CTCGGCCGAT GACGGGCAAA ATCTGATTCT GACCGCCGCT
GTCGTCGCCG TCGACGGCAA GCGGGCGGTG CGCAAGTCCA CCGCCGGGAC CCTTTCGGCG
CCCATGGATC TCGGCCGCGA CCTCGCGGCA GAGATGATCG CCGAAGGGGC AGGCACGTTG
ATAGGGGAGC AAGCACATTG A
 
Protein sequence
MSSVSSPLRL GTRRSLMATT QSGLVAARLT ELTGRAVELV GVTTFGDVTK ANLTQLGGTG 
VFVSALRDKL IDGEIDFAVH SLKDLPTTQD PRVVIAAIPP RDDPRDALVS TAKLADLPAG
SKVGTGSPRR IAQLRVLRPD LEYVPIRGNA DTRIGKVTSG ELQGVVLAAA GLGRLGREAE
ISQVFEVEEM LPAPGQGALA VECRADRTDL IEFLSVLDDA RTRAAVTAER AVLNALEAGC
AAPVGAYSAD DGQNLILTAA VVAVDGKRAV RKSTAGTLSA PMDLGRDLAA EMIAEGAGTL
IGEQAH