Gene Sros_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0548 
Symbol 
ID8663817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp553483 
End bp554805 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content71% 
IMG OID 
ProductGlutamyl-tRNA reductase 
Protein accessionYP_003336315 
Protein GI271962119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.675459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.566276 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCC TCGTGGTCGG CCTCAGCCAC CGGACGGCTC CGGTGGCCCT GCTGGAGCGG 
GTGTCCGTCT CCGGTGACGC GCTGGTCAAG TTGCTCCACG CGGTTCAGCA GGACGCGTGC
GTCGCCGAGG TCATGGCCGT CTCGACCTGC AACCGGGTCG AGGTCTACGC CGAGGTGGAC
CGGTTCCACG CCGCGGTGAC CGCGATCTCC GAGCTGCTCA GCATCCATTC GGGTGTCCCC
ATGGAGCAGC TGTCGAACCA TCTCTACGTG CACTACGAGG ACCGCGCCGT CGAGCACCTG
TTCTCGGTCG GCTCGGGCCT CGACTCGATG GTCCTGGGCG AGGGGCAGAT CCTCGGCCAG
GTCCGCTCGG CCCTCAAGCT CGCCCAGGAG CAGGGCACGC TCGGACCGAC GCTCAACGAG
CTCGTCCAGC AGGCGCTGCG GGTCGGCAAG CGCTCCCACA CCGAGACCGG CATCGACCGG
GCGGGCGCCT CCCTCGTGGG CGTGGGCCTC ACCCTCGCCG AGCGCGTGCT CGGCCCGATC
CAGGGCAAGC GCGCCCTGGT GGTCGGCGCC GGCTCGATGA GCGCCCTGTC GGCCGCGACC
CTGCAGCGGG CGGGCGTCAC CGACATCGTG GTGGTCAACC GCACCCACGA CCGCGCGGTA
CGGCTGGCCC AGACGGTGGG CGGCCGGGCC GCCGAGCTCG GCGACCTGGC GCGGGAGCTG
GCCCAGGCCG ACCTGGTCAT CTCGTGCACC GGCGCCACCG ACGTGGTCAT CACCGCGGAC
ATGGTCGTGG CCAGGGAGAT GTTCCTGCTC GACCTCGCGC TCCCTCACGA CGTGGACCCC
GCCGTACGGC GGCTGCCCGG CGTCACCCTC GTCGACCTGG AGTCGATGCA GGACGGCGCG
GCCGACGCGG AGACCGACGA CGGTGGGCGC GCCGAGGCGG TCGTCGCCGT GCGCGGGATC
GTCGCCGACG AGGTGGCGGC CTACCTGTCG GCCGAGCGCG CCGCGCGGGT GACGCCGACC
GTGGTCGCGC TCCGGAGCAA GGCGGCCGAC GTGGTCGAGG CGGAGCTCGG GCGGCTCGTC
GCCCGGGTCC CCGAGCTCGA CGGGCGGGTC CGGGACGAGG TCACGCAGAC AATCAGGCGC
GTGGTCGACA AACTGCTCCA TGAGCCCACC GTGCGTGTCA AACAGCTCGC GGAGTCTCCG
GCAGGCGATC ATTATGCGGA GGCATTGCGT GAGCTGTTCG ATTTGGACCC GAAGGTTCCC
CGTGCGGTGA GAAGTATCGA AAGGATCGAC GCCGAGACGA GTAAGAAGGA GGTGGGCAGG
TGA
 
Protein sequence
MSVLVVGLSH RTAPVALLER VSVSGDALVK LLHAVQQDAC VAEVMAVSTC NRVEVYAEVD 
RFHAAVTAIS ELLSIHSGVP MEQLSNHLYV HYEDRAVEHL FSVGSGLDSM VLGEGQILGQ
VRSALKLAQE QGTLGPTLNE LVQQALRVGK RSHTETGIDR AGASLVGVGL TLAERVLGPI
QGKRALVVGA GSMSALSAAT LQRAGVTDIV VVNRTHDRAV RLAQTVGGRA AELGDLAREL
AQADLVISCT GATDVVITAD MVVAREMFLL DLALPHDVDP AVRRLPGVTL VDLESMQDGA
ADAETDDGGR AEAVVAVRGI VADEVAAYLS AERAARVTPT VVALRSKAAD VVEAELGRLV
ARVPELDGRV RDEVTQTIRR VVDKLLHEPT VRVKQLAESP AGDHYAEALR ELFDLDPKVP
RAVRSIERID AETSKKEVGR