| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_0541 |
|---|
| Symbol | |
|---|
| ID | 8663810 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 546528 |
|---|
| End bp | 547562 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003336308 |
|---|
| Protein GI | 271962112 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.271487 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGCAC GCCGTACCGC CGGAAGGGCC CTTGTCGCCG GGCTCGCCCT GGGAGCGGCG
CTGGGGATCG CCACGCGGCG GCGCGGGGCG CACGCGGAGA CGGCGCTCGG CGGGCACCGG
GGGAGGCCGG TCACCGTCGT CACCGACGAC GGGGTACGGC TCGCGGTGGA CGTGGAGGAG
GCCGAGTCGC CCGAGTTCGC CGTGGTCCTC GCCCACGGCT GGGTGATGAA CCGGCACTGC
TGGCACTTCC AGCGGGAGGC GCTGGCCGGC AGGGCCACCC TGATCTTCTA CGACCAGCGC
GGGCACGGAG CCTCCTCGGC CGGGGCCCTC GACGCGTGCA CGGTCGACCG GCTCGGCGAC
GACCTGGCCG CGGTGATCGA ACAGGCCGTC CCCGAAGGGC TGCCGGTGGT GCTCGTCGGC
CATTCGATGG GCGGTATGAC GATCATGGCG TTCGCGGGAC GGCACCCCGC CGCCTTCGCC
TCACGCGTGG CCGGGGTGGC GCTGCTGAGC ACCTCGTCCG GCCGGCTGGC CGACAGCACG
TTCGGGCTCC CCGGGCCGAT CGGCCGGCTC GCCCCGCGCG TCACCCCGGT CGTGTTCGAC
CGCATGCTGA CCCGTGCCGC GGCCATCGAC CGCAGCTCCG CCCTCAAGTC ACGCACGAAC
CTGCCGGTGA CCCGCTACAT CGCCTTCGGC CCCCGCGCGC CGCGCGCGCA CGTCCACTTC
GTCAACGGCA TGGCCGCGGC CACCCCGACC GAGGTGATGG TCGGCTTCTT CCGCGACTTC
CTCGTCCACG ACAAGCTGGC CGCGCTGGCC GCGCTCGGCT CGGTGGAGAC GCTGGTCATG
GTCGGCGACC GTGACCGGCT CACCCCGCCC GTCCACAGCC GGCGCATCGC CCGGAGCATC
CCCGGCGCCG GACTGACCGT GCTCCCCGGT GCCGGTCACA TGATCGGGCT CGAACGGCCG
GAGGCCGTCA ACCAGGCCCT GAGCGATCTG CTGGACCGGG TCGCCCGCCG TGTGGGCGGT
CACCGGGAGC GGTAG
|
|---|
| Protein sequence | MGARRTAGRA LVAGLALGAA LGIATRRRGA HAETALGGHR GRPVTVVTDD GVRLAVDVEE
AESPEFAVVL AHGWVMNRHC WHFQREALAG RATLIFYDQR GHGASSAGAL DACTVDRLGD
DLAAVIEQAV PEGLPVVLVG HSMGGMTIMA FAGRHPAAFA SRVAGVALLS TSSGRLADST
FGLPGPIGRL APRVTPVVFD RMLTRAAAID RSSALKSRTN LPVTRYIAFG PRAPRAHVHF
VNGMAAATPT EVMVGFFRDF LVHDKLAALA ALGSVETLVM VGDRDRLTPP VHSRRIARSI
PGAGLTVLPG AGHMIGLERP EAVNQALSDL LDRVARRVGG HRER
|
|---|
| |