Gene Sros_0493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0493 
Symbol 
ID8663762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp495849 
End bp498296 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content71% 
IMG OID 
ProductDEAD/DEAH box helicase domain-containing protein 
Protein accessionYP_003336261 
Protein GI271962065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCCCCA GACGACAAGC CCCGACGCGC GGCATTCAAC CATGCGTACG CTCAGTGTCT 
ATACGAAATC ACGATTCCCG GCGACTCTGC CCACAGATGC CAGACTGGAA ACCAGTGACT
CCGCCCTCAT CCTCCTCTCT TCGAGCGGGT TCCGCGCTCC GCCACCTGCT CGGCGTTCCC
GCACGTCGCG ACCGCGTGAC CCACGTGGAG CACGTTCCAG CACGTCAGGC GGGTCAGGCC
CGCTGGCCGG ACTGGGTTCA CGAGAGCCTG GTTACGCGCT GGGCGAACCA CGGCATTTCG
GGCCTATGGT CACATCAGGC CGAGGCGGCT GAACTGGTCC ACCGTGGTCA AAACGTGATC
ATTGCCACAG GGACCGCCTC GGGCAAATCC CTCTCCTACC TGGTCCCCGC CCTCTCCTCG
GTGCTCGACG GCGGCACGAT CCTTTACCTC ACGCCTACCA AAGCACTGGC CGCCGACCAG
CTACGCGCCC TGAACGAGCT CGACGTCCCC GAGCTCCGCG CGGCCACCTT CGACGGCGAC
ACCTCCTTCG AGGAACGGGC CTGGGTCCGC AAACACGCCA ACTACGTCCT GACCAACCCG
GACATGCTCC ACCGCACCCT GCTGCCCCGC CACGCCAACT GGTCGTCCTT CTGGCGGCGG
CTGCGGATGG TCGTGGTGGA CGAATGCCAC GGCTACCGGG GTGTGTTCGG CTCCCACGTG
GCCCAGATCC TGCGCCGCCT GCGCCGCGTC TGCACACGGT ACGGCTCCGC CCCCGCCTTC
GTGCTCTCCT CGGCCACGGC CAGCGAGCCC GGGGCCTTCG CGATGCGCCT GACGGGCCTC
CAGATGGCCG AGGTGACCAC GGACGCCTCT CCTCGGGGCG CGACCACCTT CGCCCTGTGG
GAGCCTCCCC TGACCGATCT ACGCGGTGAG GGCGGCGCGC CCCTCCGCCG TCCCGCCACC
GCCGAGAGCG CCGACCTCCT CGCGGACCTG GTGATCGCCG ACGTCCGTAC CCTGGCCTTC
GTGCGCTCCC GGCGTGCCGC CGAGTCCGTG GCCCTCACCA CCCGGGCGAA GCTCCAGGAC
CTCGTGTTCG ACGTGGGGGC GCCCGGGGAT CTGCCGGACA AGGTGGCGGC CTACCGGGCC
GGATACCTGG CGGAGGACCG CCGCGGACTG GAGAAGGCGT TCCGGTCGGG AGACCTGCTC
GGGCTGGCCA CGACCAACGC GCTGGAGCTC GGCGTCGACG TGTCCGGGCT GGACGCCGTG
CTCATCGCGG GATGGCCGGG GACCCGGGCC TCGCTCTGGC AGCAGGCCGG ACGGGCCGGA
CGGGCCGGGC AGGACGCCCT GGCGGTGCTG ATCGCCAGGG ACGACCCGCT GGACACCTAT
CTGGTCCACC ACCCCGAGGC GCTGTTCGGC CGGCCCGTCG AGGCGATCGT CCTCGACCCC
GACAACCCCT ACGTGCTGGG CCCGCATCTG TGCGCCGCCG CCGCCGAGAT CCCGCTCACG
CCGGACGAGC TGCAGATCTT CGGCCCGACA GCCAAGGAGG TGCTCGCCGA CCTGGTGACG
GAGGGCCTGC TCAGGGAGCG CGCCACGGGC TGGTTCTGGA CCAGGCGGGA ACGGGCCACC
GACCTCGCCG ACATCCGGGG CGCGGGCGGC GCGCCGGTCC AGGTCGTCGA GGCGTCCACC
GGGCGGCTGC TCGGCACCGT GGACGAGCCC TCCGCCCACA CGACCGTGCA CACCGGCGCC
GTCTACGTCC ATCAGGGGGA GACCTACCTG GTCGTCGAGC TCGACCTGGA GGCGGGGGTC
GCCCTCGTCG AGGCCGGAAC CCCCGACTAC ACGACCTTCG CCAGGGACGT CACCGAGATC
TCGGTCCTGG AGTCCCTCCG CTCGCACCCG CTCGGCCCGG GAGAGCTCCA CTTCGGCTCC
GTGGAGGTCA CCCGTCAGGT CGTGTCCTAC CTCAAGCGCC GCGCCCAGAG CGGCGAACTC
CTGGGCGACG AGCCCCTCGA CCTGCCCCCG CGCACGCTGC GCACCCGCGC GGTGTGGTGG
ACGCTGCCCA CCTCCGCGGT CGTCTCCCTG GCCGAGGACG GCCTTGACCT GGGCGGGGCG
GCACACGCGG CGGAACACGC CTCCATCGGC CTGCTCCCGC TCTTCGCGAC CTGTGACCGC
TGGGACATCG GCGGCGTCTC CACCGAGCTC CATCCCGACA CCGGGCTACT CACCGTCTTC
GTCTACGACG GTCACGAAGG CGGCGCGGGC TTCGCCGAGC GCGGCTACGC CCGCGCCCTC
GACTGGCTCA CGGCCACCCG GGAGGCCATC GCCTCCTGCG AGTGCGAACG CGGCTGCCCC
TCATGCATCC AGTCGCCCAA GTGCGGCAAC GGCAACGAAC CCCTGGACAA GGCGGGAGCC
CTCCGTCTCC TCGCCGTCCT GCTCTCCGCC GACCCGCAGC GCACCTGA
 
Protein sequence
MAPRRQAPTR GIQPCVRSVS IRNHDSRRLC PQMPDWKPVT PPSSSSLRAG SALRHLLGVP 
ARRDRVTHVE HVPARQAGQA RWPDWVHESL VTRWANHGIS GLWSHQAEAA ELVHRGQNVI
IATGTASGKS LSYLVPALSS VLDGGTILYL TPTKALAADQ LRALNELDVP ELRAATFDGD
TSFEERAWVR KHANYVLTNP DMLHRTLLPR HANWSSFWRR LRMVVVDECH GYRGVFGSHV
AQILRRLRRV CTRYGSAPAF VLSSATASEP GAFAMRLTGL QMAEVTTDAS PRGATTFALW
EPPLTDLRGE GGAPLRRPAT AESADLLADL VIADVRTLAF VRSRRAAESV ALTTRAKLQD
LVFDVGAPGD LPDKVAAYRA GYLAEDRRGL EKAFRSGDLL GLATTNALEL GVDVSGLDAV
LIAGWPGTRA SLWQQAGRAG RAGQDALAVL IARDDPLDTY LVHHPEALFG RPVEAIVLDP
DNPYVLGPHL CAAAAEIPLT PDELQIFGPT AKEVLADLVT EGLLRERATG WFWTRRERAT
DLADIRGAGG APVQVVEAST GRLLGTVDEP SAHTTVHTGA VYVHQGETYL VVELDLEAGV
ALVEAGTPDY TTFARDVTEI SVLESLRSHP LGPGELHFGS VEVTRQVVSY LKRRAQSGEL
LGDEPLDLPP RTLRTRAVWW TLPTSAVVSL AEDGLDLGGA AHAAEHASIG LLPLFATCDR
WDIGGVSTEL HPDTGLLTVF VYDGHEGGAG FAERGYARAL DWLTATREAI ASCECERGCP
SCIQSPKCGN GNEPLDKAGA LRLLAVLLSA DPQRT