Gene Sros_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0479 
Symbol 
ID8663748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp480519 
End bp481565 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003336248 
Protein GI271962052 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.778166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACCGCC CTCTGGTCAT CACCGAGGAT CATGATCTGC TTGACGACCT GCTCCGTGTC 
GCCGCGGCGG CCGGAGCCGA GCTTGACGTC GCGCACGTGC CCGCACACGC CCGGCCCCAC
TGGAACCGTG CCCCGCTGGT CGTCGTCGGC AGCGACATGG CCGACGCCCT GGCCGCCACC
GGACCGCCGC CCCGGCACCG GGTCATCCTC GTCACCCGCA CTCCCGATGA TCCTGACACC
TGGCGAAAGT GCGTCACGGT CGGTGCCCAG GCCGTGTTGG AGCTGCCCTC GGCCGAGCGG
CAACTGGTCG ACGAGTTCGC CGATGTCGTG GAGCCGGAGG CCAGAGCGGG ACTCGTGGTC
TGCGTCGCCG GTGGACGCGG GGGAGCCGGA GCCAGCGTCC TCGCCACCTC GCTGGCGCTG
AGCGCCTCCC GGCGGCACCT CCGCACCCTC CTCGTCGACG CCGATCCGCT CGGTGGCGGC
CTGGATCTGC TTCTCGGTCA GGAGGAGGCC GACGGAGCAC GCTGGTCCGA CCTGGTCGCC
CGTGAGGGCA GGGTGAGCTT CACCGCGCTC CAGGCCGCCC TGCCCACCTT CGCCGAGCTG
ACCCTGCTCT CCTTCCACCG CGGCGAGGTC GAGCCCATCC CCGCTGAGGC GATGCGCTCG
GTTCTCGAAG CGGGCCGACG AGGCTTCGAT CTGGTGGTCG TCGACCTGCC CCGCCACCCC
GACCAGGCTG CCGTGGAGGC GCTCAGCAGG GCCTCCACCA CCTTGCTGGT CGTCACCGCC
GATGTGCGCG GGGTGCTCGC GGCGGCCCAG GTGCTCGCCG GGCTGCGCAA GCACACCGGA
GAGGTGCACG CCGTCGTGCG CGGCGGCGTC CTTGACGACG AGGTGGTCAC AGCCTCGCTC
CGCGTGCCGT ATGCCGGCAG CCTCCCCGAC CAACCCCGCC TCGCCGTCGC CCTCAACCGC
GGTGATGTCC CCCCACTCGG CCGCCGGACC TCGCTCGGCC GGTTCTGCGC CTCGTTCCTG
GACTCGCTGC TCGGGGTGGA GAGTTGA
 
Protein sequence
MDRPLVITED HDLLDDLLRV AAAAGAELDV AHVPAHARPH WNRAPLVVVG SDMADALAAT 
GPPPRHRVIL VTRTPDDPDT WRKCVTVGAQ AVLELPSAER QLVDEFADVV EPEARAGLVV
CVAGGRGGAG ASVLATSLAL SASRRHLRTL LVDADPLGGG LDLLLGQEEA DGARWSDLVA
REGRVSFTAL QAALPTFAEL TLLSFHRGEV EPIPAEAMRS VLEAGRRGFD LVVVDLPRHP
DQAAVEALSR ASTTLLVVTA DVRGVLAAAQ VLAGLRKHTG EVHAVVRGGV LDDEVVTASL
RVPYAGSLPD QPRLAVALNR GDVPPLGRRT SLGRFCASFL DSLLGVES