Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_0469 |
Symbol | |
ID | 8663738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 469522 |
End bp | 470247 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | DNA-(apurinic or apyrimidinic site) lyase |
Protein accession | YP_003336238 |
Protein GI | 271962042 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.751701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGGTGC CTCGCAACGT CGGTCGTGCT GGTGAATCCC CGCTTGCCCT GGTCCGTCGC GCTCGGCGGA TGGATCGCAT CCTGGCGGAA ACCTACCCAG ATGCGCACTG CGAACTCGAC TTCCGCAACC CCCTGGAGCT GCTGGTCGCG ACGATCTTAT CTGCGCAGTG TACGGACAAA AGAGTCAACA TGGTTACTCC AACGCTTTTT GCGAAATATC GGACAGCGGA GGATTACGCC GGGGCCGACC GGGCCGAGGT GGAGGACATC ATCCGGTCCA CGGGGTTCTT CCGGGCCAAG ACCAACAGCA TCGTCGGCAT GGCCCAGGCC CTGTGCGACC GCTACGGCGG AGAGGTCCCC GGCAAGCTCA AAGACCTGGT CACCCTGCCG GGCGTCGGCC GTAAGACCGC CAACGTGGTG CTCGGCAACG CCTTCGGGGT CCCCGGCATC ACCGTGGACA CCCACTTCCA GCGGCTCGTC CACCGGTTCC ACTGGACGGA GGAGACCGAC CCGGTCAAGA TCGAACACAT CGTCGCGGGG CTCATCCCGA AACGCGACTG GACGATGATG TCCCACCGCC TGATCTGGCA CGGCCGCCGC ATGTGCCACG CCCGCACGCC CGCCTGCGGC GTGTGCCCGC TCGCCGCGCT CTGCCCTTCG TACGGCATCG GCCCCGTCGC CCCCGCCCAG GCCGCCAAAC TGGTACGCCC CGGCCCCTTC TCGTGA
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Protein sequence | MQVPRNVGRA GESPLALVRR ARRMDRILAE TYPDAHCELD FRNPLELLVA TILSAQCTDK RVNMVTPTLF AKYRTAEDYA GADRAEVEDI IRSTGFFRAK TNSIVGMAQA LCDRYGGEVP GKLKDLVTLP GVGRKTANVV LGNAFGVPGI TVDTHFQRLV HRFHWTEETD PVKIEHIVAG LIPKRDWTMM SHRLIWHGRR MCHARTPACG VCPLAALCPS YGIGPVAPAQ AAKLVRPGPF S
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