Gene Sros_0428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0428 
Symbol 
ID8663696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp428954 
End bp430126 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content71% 
IMG OID 
ProductL-rhamnose isomerase 
Protein accessionYP_003336199 
Protein GI271962003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGACA TCAGGGCCAC GCTACGGGCG CAGGCCATCG AGACCCCGTC GTGGGCGTAC 
GGCAACAGCG GCACCCGGTT CAAGGTGTTC GCCCAGCGGG GCGTGCCGCG GGACCCCTAC
GAGAAGCTGG CCGACGCGGC CCAGGTGCAC GCCTTCACCG GGGTCGCGCC GACGGTGGCG
CTGCACATCC CGTGGGACAG GGTCGACGAC TACGCCGACC TGGCCCGGCA CGCGTCCGAG
GTGGGCGTGC GGATCGGCGC GATCAACTCC AACGTCTTCC AGGACGACGA CTACCGGCTG
GGCAGCGTCA CCAACCCCGA CCCGGCGGTG CGGCGCAAGG CCCTGGACCA CCTGCTGGCC
TGCGTGGACG TCATGGACGC CACCGGGTCC GACACGCTGA AGCTGTGGTT CTCCGACGGC
ACCAACTATC CCGGCCAGGA CGACATCCGC TCCCGGCAGG ACCGGCTGGC CGAGGCGCTG
TCGGCCGTCT ACGGGCGGCT GGGCGAGGGA CAGCGGTTCC TGCTGGAGTA CAAGCTGTTC
GAGCCCGCCT TCTACGTGAC CGACGTGCCC GACTGGGGCA CCGCCTACGC GCACTGCCTG
CGGCTGGGTG ACAAGGCACA GGTGGTGGTG GACACCGGGC ACCACGCGCC GGGCACCAAC
ATCGAGTTCA TCGTGGCGTT CCTGCTCCGG GAGGGCAAGC TCGGCGGGTT CGATTTCAAC
TCCCGCTTCT ACGCCGACGA CGACCTGATG GTCGGCGCGG CCGACCCGTT CCAGCTCTTC
CGGATCATGT ACGAGGTGAT CCGCGGCGGC GCCCTCTCCG GACGGCACGG CGGGCCGGAG
CAGGGAGTGG CGTTCATGCT CGACCAGTGC CACAACATCG AGCCGAAGAT CCCCGGCCAG
ATCCGGTCGG TGATGAACAT CCAGGAGGCC ACGGCCAAGG CGCTGCGGGT CGACGCGGAC
GCGCTGGCCG CGGCCCAGGC CGAGGGCGAC GTGCTGGCCG CCAACGCCGT GCTGATGGAC
GCCTACAACA CCGACGTCCG GCCGCTCCTG GCCGAGCTGC GCCAGGAGAT GGGCCTCGAT
CCCGACCCAA TGGCCGCCTA CGCCCGTTCC GGCTACTTCG AGAAGATCGC CGCCGAGCGG
GTCGGCGGCA CCCAGGCGGG CTGGGGCGCC TGA
 
Protein sequence
MSDIRATLRA QAIETPSWAY GNSGTRFKVF AQRGVPRDPY EKLADAAQVH AFTGVAPTVA 
LHIPWDRVDD YADLARHASE VGVRIGAINS NVFQDDDYRL GSVTNPDPAV RRKALDHLLA
CVDVMDATGS DTLKLWFSDG TNYPGQDDIR SRQDRLAEAL SAVYGRLGEG QRFLLEYKLF
EPAFYVTDVP DWGTAYAHCL RLGDKAQVVV DTGHHAPGTN IEFIVAFLLR EGKLGGFDFN
SRFYADDDLM VGAADPFQLF RIMYEVIRGG ALSGRHGGPE QGVAFMLDQC HNIEPKIPGQ
IRSVMNIQEA TAKALRVDAD ALAAAQAEGD VLAANAVLMD AYNTDVRPLL AELRQEMGLD
PDPMAAYARS GYFEKIAAER VGGTQAGWGA