Gene Sros_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0410 
Symbol 
ID8663678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp410108 
End bp410677 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003336182 
Protein GI271961986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCACG ATAGCCTCAT GGACTCCGGT ACACAAAGCC CCCGTCCCGC CCGGGACATC 
GGAACACCGG ACGTAGGTCA GCGAATCCGC AGGTTAAGGG AGGAACGCGG CATCTCGCTC
TCCGAACTCG CCCGGCGCGC GGGCGTCGGC AAGGCCACGC TCTCCGGCCT GGAGAACGGC
ACCCGCAACC CCACCCTGGA GACGCTCTGG GCGGTCACCG CCCAGCTCGG CGTGCCTCTG
GCGCTGGCCG TGGGCACCGG CCCCGTCATC CGCGGCACCG CCGTCGAGGG CGTGCTGCTC
CAGGTCTTCG AGGATGAGGC CGTCACCTAC GAGCTCTACC GGCTGACGAT CCCGGCCGGG
GCCACCCAGG TCTCGCCGGC CCATCATGAG GGTGTCACCG AGCACATCAC GGTCTTCGCC
GGGGTGCTGA GCGCCGGCCC GCAGGACGCG CCGCTCCGGG CCGGACCGGG AGAACATCTC
ACGTGGCGCT CGGACGTCCC GCACACCTAC GCCGCGATCG GCGACCAGGA CGTCCACGCC
AGCCTGCTCA TGCGCTATCC CCACCGGTGA
 
Protein sequence
MLHDSLMDSG TQSPRPARDI GTPDVGQRIR RLREERGISL SELARRAGVG KATLSGLENG 
TRNPTLETLW AVTAQLGVPL ALAVGTGPVI RGTAVEGVLL QVFEDEAVTY ELYRLTIPAG
ATQVSPAHHE GVTEHITVFA GVLSAGPQDA PLRAGPGEHL TWRSDVPHTY AAIGDQDVHA
SLLMRYPHR