| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_0379 |
|---|
| Symbol | |
|---|
| ID | 8663647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 371434 |
|---|
| End bp | 372099 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_003336153 |
|---|
| Protein GI | 271961957 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.467604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCCGC GCATTCCCGT CAGCGTGGAT CTGGTCGTCC TCACGGTGCG CTGCCAGGCG
CTGAGCGCGC TCGTCTGGCG GCGGGACAAA TCGCCTTACG AGGGACGCTG GGCCCTCTCA
GGCGGCTTCA TCCAGCTTGA CGAGGATCTG CCCGCCGCCG CGGCCCGGGT CCTCGCCGAA
CGGGCCGGCC TGCCCGGCGC CCCGGTCCAT CTGGAGCAGC TCCAGACCTA CGGCTACCCC
GACCGCGACC CGCGCCAGCG CGTCCTGAGC GTCGCCTACC TCGGTCTCGC CCCCGACCTG
CCGGCCTCCA CCGAGGCGCA CATGAGCTGG CAGCCGGTCT CCTCGCTCCG GGAGATGGCC
TTCGACCACC GGCGCATCAT GGTCGACGGG ATCGAGCGCG CCCGGGGCAA GCTTGAGTAC
ACCCCGCTGG GCGCGGCCTT CTGCCCCCCG GAGTTCACCG TCGCCGACCT GCGCCGGGTC
TACGAGATCG TCTGGGGCCG CACCCTGGAC CCGCGCAACT TCCACCGCAA GGTCACCAAG
GCCGAGGGCT TCCTGGTGCC CACCGGCCGC ACCACCACCC GCGACGGCGG CCGTCCCGCC
AAGCTCTACC GCCGGGGACC GGCCTTGCTG CTCCACCCCC CGATGCTCCG CTCCCTCAAG
GAGTAG
|
|---|
| Protein sequence | MVPRIPVSVD LVVLTVRCQA LSALVWRRDK SPYEGRWALS GGFIQLDEDL PAAAARVLAE
RAGLPGAPVH LEQLQTYGYP DRDPRQRVLS VAYLGLAPDL PASTEAHMSW QPVSSLREMA
FDHRRIMVDG IERARGKLEY TPLGAAFCPP EFTVADLRRV YEIVWGRTLD PRNFHRKVTK
AEGFLVPTGR TTTRDGGRPA KLYRRGPALL LHPPMLRSLK E
|
|---|
| |