Gene Sros_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0335 
Symbol 
ID8663603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp323627 
End bp324310 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content70% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003336110 
Protein GI271961914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0236127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGA TGTCCAATCA GGAGGAGACA ATCGTGGAGT CCTTCACCGG CGGTAGGCTG 
CCGCCGGACG ATGTCGTCGT GGCGGCCCTG CGCGCCGGAG ACGAAGCGAT GTTCGCGACG
CTGCTGGACA CCTGGTCGCG GGGGATGCTG TGGCTGGCCC GCACGCACGT GTCCACCAAC
GACTCGGCGG AAGAGATCGT GCAGGACACC TGGCTGGCGG TCGTCAGGGG GATCGGCGGC
TTCGAGGGAC GCTCGTCGGT CAAGACCTGG GTCTACCGGA TCCTGGTCAA CACGGCCAAG
AAGCGAGGCA TGCGCGAGAA CCGCACGGTC CCGTGGAGCA GCGTCTTCGA GCAGGAGAGA
CCGACCGTCG ACCGCTCGCG TTTCCAGGGC GTGGACGACC CCCTCCCCGG ACACTGGAAG
GAGCTCCCCG CGGCCTGGCC GACCCCGGAG GGCGAGGTGC TCGCCGCGGA GGTGCGCGGC
CGGATCGCGG CGGCGCTGGC GGAGCTGCCG CCCCGGCAGC GGGCGGTGAT CACACTCCGC
GACGTGGAGG GGTGCACGTC TGAGGAGGTC TGCGAGATCC TGGAGATCTC CGCGGCCAAC
CAGCGCGTGC TGCTGCACCG CGCCCGCGCG TCGGTGCGCG GGCAGCTGGA GGACTATTTC
GAGACGGCGA GGCGGTCGGC GTAG
 
Protein sequence
MSQMSNQEET IVESFTGGRL PPDDVVVAAL RAGDEAMFAT LLDTWSRGML WLARTHVSTN 
DSAEEIVQDT WLAVVRGIGG FEGRSSVKTW VYRILVNTAK KRGMRENRTV PWSSVFEQER
PTVDRSRFQG VDDPLPGHWK ELPAAWPTPE GEVLAAEVRG RIAAALAELP PRQRAVITLR
DVEGCTSEEV CEILEISAAN QRVLLHRARA SVRGQLEDYF ETARRSA