Gene Sros_0251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0251 
Symbol 
ID8663519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp240691 
End bp241911 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content69% 
IMG OID 
Productsugar efflux transporter 
Protein accessionYP_003336030 
Protein GI271961834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAACGGG CGAGAACAGG AAGAGACCGT ACGATCACGC GACGTCCGGC TCCATGGCAC 
AGGCTGGCGG TGCTCGGGGC TCTGATGCTG GCCGCCCTCA CCTTCAACAC CGCGGAGAAC
CTGCCGGTCG GCCTCCTGAG GCTCATGTCC GAAGACCTAC GGGTGTCCCT GTCAGCGGTG
GGTCTCCTGG TCACCGGCTA CGGCGTTGCG GTGGCCATCG CATCTGTGCC GATTGCCCAC
GTCGTGCGGG CCGTGCCCCG ACGTTATGTG CTCACAGGAC TGCTGGCCGC ACTCGTGGTG
TCCAGTCTCG TTGCCGCGCT GACCCCCTCT TACTGGCTGC TCCTCGTGGC GCGGCTGCTG
ACCGCGCTCG CCCAGGCGCT GTTCTGGGCC GTGATGGGGC CGGTCGCGGT GGGCCTGTTC
GCGCCCGAGG TCCGGGGGCG TGTGGTCGGG GCGCTGTCCG TGGCTGGTTC GCTCGCCCTG
GTGCTCGGTG TTCCCGCTGG GACCTGGCTG GGCCGGCAGA GCACCTGGCA GGTGCCCATC
GCCATGCTGG CGGCTCTGGG GCTGGTCTCT TTGGTGACGA TCGCCGTTCT GCTGCCGACG
TCGCGTCCGG AAGAAGAGCC TGCCGCCTAC GCGACCAGTC CCGACGTGTG GCGGTTCGGG
ACGGTGCTGG CGGCCGGAGC CTTGTCCGCC GCCGGGGCGT TCACGGGATA CACCTACATC
GTGACGTTCC TGGGCGACGT GAGCGGGTTC TCCCCCAGCG CAGTCAGCGT CCTGTTCGTG
GTTTTCGGTG TCGCGTGTCT GGCCGGGGTG AGCATCACCG GGGCGTTCCT GGACCGCTTT
CCGCAGTCCG CGCTGGCCAC CGCCGTGGCC ACGCAGGCGG TGGGCATGCT AGGCCTGTAC
GCGTTCGGCG CTCATCCGGT GGCGGCGGTG ATGTCCCTTA CGCTGATGGG TGGCGCACTC
GGCCCGGTGT TCATGACCAC GCAGAACACG ATGCTGCACT GCGCGCCGGG CCGCACGGAC
ATTGCCTTCG CGGCGAACTC CGGTGCTTAC AATGCCGGCA TCGCGGCGGG TGCCGCGCTT
GGGGGACTGG TCCTGTCGCT CGCCGATGTA CGGAGCACCT TCCTCGCCGG CGGGCTGCTG
ACCGTCGGGT CCTGCGCGGT CCTGCTCGGA GGCCACCTGC TGCATGGGCG CCGTCGTCCA
GAACGCTCAA CACTTCGATG A
 
Protein sequence
MQRARTGRDR TITRRPAPWH RLAVLGALML AALTFNTAEN LPVGLLRLMS EDLRVSLSAV 
GLLVTGYGVA VAIASVPIAH VVRAVPRRYV LTGLLAALVV SSLVAALTPS YWLLLVARLL
TALAQALFWA VMGPVAVGLF APEVRGRVVG ALSVAGSLAL VLGVPAGTWL GRQSTWQVPI
AMLAALGLVS LVTIAVLLPT SRPEEEPAAY ATSPDVWRFG TVLAAGALSA AGAFTGYTYI
VTFLGDVSGF SPSAVSVLFV VFGVACLAGV SITGAFLDRF PQSALATAVA TQAVGMLGLY
AFGAHPVAAV MSLTLMGGAL GPVFMTTQNT MLHCAPGRTD IAFAANSGAY NAGIAAGAAL
GGLVLSLADV RSTFLAGGLL TVGSCAVLLG GHLLHGRRRP ERSTLR