Gene Sros_0229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0229 
Symbol 
ID8663496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp221957 
End bp222469 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content67% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003336012 
Protein GI271961816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGA ACGGAGGTCC CCCGCGTCCT TGGGTCGTGG AGTTCACCGA TTTCGTCGCC 
GCGCGGGGGA ACGCGCTGTA CCGGTACGGC TACGTCCTCA CCGGTAACGC CGAGGATGCG
GCCGACCTGA CCCAGGAGGC GCTGATGCGC TTGGGGGACG CATGGTCCAG GATCCGGAAA
AAAGATGATC CAGAGGGGTA CGTCCGCACG ACCATGGCCC GCCTGCACAT CAGTCTCTGG
CGGCGGCTGC GCAGGGAACG GCTGGTCGAG GCGGTTCCCG AGGTGACCTA CACCGACGAT
CGCCTCGACG GCGACGTCGG CCTGTGGAAA GAGCTGGAGG GCCTGCCGCC CAAACAGCGG
GCGGTGCTGG TCCTGCGCTA CTACGAGGAC CTGCCGGACC AGGAGATCGC CGAGCTCCTC
GGCATCTCGC GCGGCACGGT GCGCAGCCAG GCGGCCCGCG CGCTGGACAA ACTCAGGATC
CGGATCACCG ATCTCGAAAC GGGGCGAGTG TGA
 
Protein sequence
MQQNGGPPRP WVVEFTDFVA ARGNALYRYG YVLTGNAEDA ADLTQEALMR LGDAWSRIRK 
KDDPEGYVRT TMARLHISLW RRLRRERLVE AVPEVTYTDD RLDGDVGLWK ELEGLPPKQR
AVLVLRYYED LPDQEIAELL GISRGTVRSQ AARALDKLRI RITDLETGRV