Gene Sros_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0168 
Symbol 
ID8663434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp172916 
End bp174997 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003335963 
Protein GI271961767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACCG CAGCCGCAGC ACGCCTGCAC CTCTGGGATG CCAACCCCTA CGTGCTCACC 
AAACGCCAGG TCCGCCGCGG CACCCGGAGG GCGGAGACCT CACGGTTCCA CGACGACATC
TGGACTCTCA CCCCGGCGAT ACTCCAGCGG CACAAGAACG CGCTGATCCT GAACTTCACC
ACCGTTCCCG AACGGTTCCG CATCACCGCC AAGGAGCTGT GTTACGCGCT GCTATCCCTT
GACTTGCCGC CCGGCGAACG GGTGAGCAAC GTCGAGACGA TCCGCGGCTA TCACGCCGGG
GTCAGCCAGT TCCTCACCTG GGTCGACAGC CGCGGCATCC CCACCCTGGC CTCCATCACC
GCCGTCGACC TGGACGCCTA CAACGACCAC ATTCTGACTA CCGGCCGATC TTCCAGCTGG
GCTGCCCAGC TCCGCTACGC GGTCCGGCTG CTCTGGACCT ACTCCTCCAA ACTCCCAACG
GACTCACTCG CCCTCGACCC AGGCATCGTC GACTCCTGGA GACAGGTGGC GACGAGGAAC
CGACCGCCGG AGAACGCCAC ACCGCGCATC CCCGAGCAGG TCATCTCGCC CCTGCTCACC
TGGGCGTTGA TCTGGATCAA CGAGCTCGCC GACGACGTCC TGGCGGCGGC GGCCGAATGG
CGTCCCCTGC ACGCCAACAC CCGGCTTAAC CGCAGGCGCC GCAACGCCCC CCGCACCACA
GGCATCGCCG CGCAGCTCGG GGTTGTGCTC CGCCGCTATC GGATCGAAGG CCGTCCCTTG
CCTGGGGGCA AGAAGGGCCA GCCGATGCAC AGTCACCTGG CCAGGGAGAT CGGATGCACC
CCTGGGGCGC TCATCGCGAA GGGCTGTCAG GAACTTCTCA CCAAGGCCGC CGCCGAACTC
GGAGTCGCCG ACACCGCCTA CCTACGCACC CCCGCCGCCG CCTTCCTCGA CGGAGAGCCA
TGGATCGAGC AGATCCCCTA CGCGGCCATG GAAGAACTCG GCCGGATGCT CCAGACCGCA
GCCTGGATCA CCATCGCCTA TCTCTCCGGC ATGCGGGACT CCGAAGTGAA GCACCTCAAG
CGCGGTTGCC TGGAGGTCAG CCGGACTGAG GATGGCCACA TCTACCGGCG GAAGATCAAC
AGCTTGGCCT TCAAGGGCGA AGACGACCCG GTCGGAGTTC CCGCGACCTG GATCGTCGGC
CAGCCCGTCG AACGCGCCAT CCAGCTCCTG GAACAGCTCC AGCCTCGCCA CCAAGACCAG
CTCTTCGCCA TCCTGCCCGG CTCCCGCGGC CACCTGCGCA CCAACGCCAC CGGCGCCAAG
AGCACCCAGC AGACCAACAA CGACCTCGCC GCTTTCACCG ACTGGATCAA CGACTTCTGC
CACCAGCGTC AGCGGCGTGA CGGGATTCCC CTGGTCAACG GGCAGCGTTG GAACCTTACC
ACCAGCCAGT TCCGTCGCAC CCTCGCCTGG TTCATCGCTC GCCAGCCCGG TGGTGTCATC
GCCGGAGCCA TGGCTTACCG GCACCATCGC CTCCAGATGT TCGAAGGCTA CGCCGGCACC
TCCGCCTCGG GATTCCGCGC CGAAGTCGAA GCCGAAGAAG CCATCGCCCG CGGCGAGCAC
CTCTGTGACC TGGTCGTCAA CCACGACTAC CACCCTCTTA CCGGCCCCGC CGCAGCGGAA
GCCGAAACCC GGCTCCTGGA CTTTCAACGC CACGTCACCT TCGAAGGAAA GATCATCACC
GAGCCGCGGC GGCTCAAACG GGTGATGGAC CGGCACGATC CGCACATCTA CCCCGGCCAA
CACGTGACCT GCGTCTACAA CGCCGATCGC GCCCTCTGCC GCCGCGACGA CCCTGCCGAA
GGACCGTCGC TACCCGACTG CCAGCCCCTG GCCTGCCGGA ACGTCACTCT CAGCACCGAC
AACCTCGACG CACTCCGGCA CCACCGCGCC CGCCTGGAGC GCGCACTCGG CCGAGGCGGG
CTCACCGCCC CATACCTTCG GCATCGGCTC GAACAACAGC ACGCCGAAAT TGGCGCCTTC
CTCGATAAAT ACACCTCAGC GCCAGCACGG GAGACCACGT GA
 
Protein sequence
MNTAAAARLH LWDANPYVLT KRQVRRGTRR AETSRFHDDI WTLTPAILQR HKNALILNFT 
TVPERFRITA KELCYALLSL DLPPGERVSN VETIRGYHAG VSQFLTWVDS RGIPTLASIT
AVDLDAYNDH ILTTGRSSSW AAQLRYAVRL LWTYSSKLPT DSLALDPGIV DSWRQVATRN
RPPENATPRI PEQVISPLLT WALIWINELA DDVLAAAAEW RPLHANTRLN RRRRNAPRTT
GIAAQLGVVL RRYRIEGRPL PGGKKGQPMH SHLAREIGCT PGALIAKGCQ ELLTKAAAEL
GVADTAYLRT PAAAFLDGEP WIEQIPYAAM EELGRMLQTA AWITIAYLSG MRDSEVKHLK
RGCLEVSRTE DGHIYRRKIN SLAFKGEDDP VGVPATWIVG QPVERAIQLL EQLQPRHQDQ
LFAILPGSRG HLRTNATGAK STQQTNNDLA AFTDWINDFC HQRQRRDGIP LVNGQRWNLT
TSQFRRTLAW FIARQPGGVI AGAMAYRHHR LQMFEGYAGT SASGFRAEVE AEEAIARGEH
LCDLVVNHDY HPLTGPAAAE AETRLLDFQR HVTFEGKIIT EPRRLKRVMD RHDPHIYPGQ
HVTCVYNADR ALCRRDDPAE GPSLPDCQPL ACRNVTLSTD NLDALRHHRA RLERALGRGG
LTAPYLRHRL EQQHAEIGAF LDKYTSAPAR ETT