Gene Sros_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0142 
Symbol 
ID8663407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp143750 
End bp145012 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content69% 
IMG OID 
ProductSerine--tRNA ligase 
Protein accessionYP_003335939 
Protein GI271961743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.116437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGACC TGCGTACCCT TCGTGAGGAT CCCGACCGGC TACGGGCGTC GCAGCGTGCC 
CGCGGTGAGG ACGACTCCGT CGTCGAAACG CTGCTCGACC TCGACAGCCG CCGGCGCGGC
GCGCTGAGCC GGTTCGAGAC GCTGCGCGCC GAGCAGAAGA GCATCGGAAA GACGGTCTCC
CGTGCCTCCG GGGACGAGAA GGCCGCCCTC CTCGACCGGG CCAAGGATCT CGCGGCGCAG
GTCAAGTCGG CCGAGAGCGA GGCCGAGAAG CTCGCCGGGG AGCTCGACAA CCTGCTCTAC
ACGGTGCCCA ACCTCGTGGA GGAGGGGGCT CCGGCCGGCG GCGAGGACGA CTTCGTGCTG
ATCGAGGAGG TCGGCGAGAA GCCGTCCTTC GACTTCGAGC CCAAGGATCA CCTGGAGCTC
GGCGAGCTGC TCGGCGCGAT CGACATGGAG CGCGGCGCGA AGGTCTCCGG CTCGCGGTTC
TTCTTCCTCA GGGGCGTCGG CGCGCGGCTC CAGCTCGGCC TGCTCAACAT GGCCATGCAG
CAGGCGATCG AGGCGGGCTT CATCCCGATG ATCCCCCCGG TGCTGGTCAA GCCCGAGTCG
ATGAAGGGCA CCGGCTTCCT CGGCGAGCAC GCCAGCGAGG TCTACCACCT GCCCGAGGAC
GACCTGTTCC TGGTCGGGAC GAGCGAGGTG CCGATGGCGG CCTACCACGC CGACGAGATC
CTCGACGGCG GCTCGCTGCC GTACCGCTAC GCCGGATGGT CCACCTGCTT CCGCCGCGAG
GCCGGCTCGT ACGGCAAGGA CACCCGGGGC ATCATCCGGG TCCACCAGTT CGACAAGGTG
GAGATGTTCT CCTACACCCG CCCCGAGGAC GCGCACGAGG AGCACCTGCG CCTGCTCGAC
TGGGAGAAGG AGATGCTCGC CAAGGTCGAG CTGCCCTACC GGGTGATCGA CATCGCGGGC
GGCGACCTGG GCGTCTCGGC GGCCCGCAAG TTCGACTGCG AGGCGTGGCT GCCCACCCAG
GGCCAGTACC GCGAGGTCAC CTCGACCTCC AACTGCACCG GCTTCCAGGC CCGCCGCCTC
GCCGTGCGCT ATCGCGACAA GGACGGCAAG CCCCAGCACG TGGCCACGCT GAACGGCACC
CTGGCCACCA CCCGCTGGAT CGCCGCCATC CTGGAGAACC ACCAGCAGGC CGACGGCTCC
GTCGTGGTCC CCAAGGCCCT GCGCCCCTAC GTCGGCCTCG ACGTCCTCGA ACCCGTCAAG
TAA
 
Protein sequence
MIDLRTLRED PDRLRASQRA RGEDDSVVET LLDLDSRRRG ALSRFETLRA EQKSIGKTVS 
RASGDEKAAL LDRAKDLAAQ VKSAESEAEK LAGELDNLLY TVPNLVEEGA PAGGEDDFVL
IEEVGEKPSF DFEPKDHLEL GELLGAIDME RGAKVSGSRF FFLRGVGARL QLGLLNMAMQ
QAIEAGFIPM IPPVLVKPES MKGTGFLGEH ASEVYHLPED DLFLVGTSEV PMAAYHADEI
LDGGSLPYRY AGWSTCFRRE AGSYGKDTRG IIRVHQFDKV EMFSYTRPED AHEEHLRLLD
WEKEMLAKVE LPYRVIDIAG GDLGVSAARK FDCEAWLPTQ GQYREVTSTS NCTGFQARRL
AVRYRDKDGK PQHVATLNGT LATTRWIAAI LENHQQADGS VVVPKALRPY VGLDVLEPVK