Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_0142 |
Symbol | |
ID | 8663407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 143750 |
End bp | 145012 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | Serine--tRNA ligase |
Protein accession | YP_003335939 |
Protein GI | 271961743 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.116437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTGACC TGCGTACCCT TCGTGAGGAT CCCGACCGGC TACGGGCGTC GCAGCGTGCC CGCGGTGAGG ACGACTCCGT CGTCGAAACG CTGCTCGACC TCGACAGCCG CCGGCGCGGC GCGCTGAGCC GGTTCGAGAC GCTGCGCGCC GAGCAGAAGA GCATCGGAAA GACGGTCTCC CGTGCCTCCG GGGACGAGAA GGCCGCCCTC CTCGACCGGG CCAAGGATCT CGCGGCGCAG GTCAAGTCGG CCGAGAGCGA GGCCGAGAAG CTCGCCGGGG AGCTCGACAA CCTGCTCTAC ACGGTGCCCA ACCTCGTGGA GGAGGGGGCT CCGGCCGGCG GCGAGGACGA CTTCGTGCTG ATCGAGGAGG TCGGCGAGAA GCCGTCCTTC GACTTCGAGC CCAAGGATCA CCTGGAGCTC GGCGAGCTGC TCGGCGCGAT CGACATGGAG CGCGGCGCGA AGGTCTCCGG CTCGCGGTTC TTCTTCCTCA GGGGCGTCGG CGCGCGGCTC CAGCTCGGCC TGCTCAACAT GGCCATGCAG CAGGCGATCG AGGCGGGCTT CATCCCGATG ATCCCCCCGG TGCTGGTCAA GCCCGAGTCG ATGAAGGGCA CCGGCTTCCT CGGCGAGCAC GCCAGCGAGG TCTACCACCT GCCCGAGGAC GACCTGTTCC TGGTCGGGAC GAGCGAGGTG CCGATGGCGG CCTACCACGC CGACGAGATC CTCGACGGCG GCTCGCTGCC GTACCGCTAC GCCGGATGGT CCACCTGCTT CCGCCGCGAG GCCGGCTCGT ACGGCAAGGA CACCCGGGGC ATCATCCGGG TCCACCAGTT CGACAAGGTG GAGATGTTCT CCTACACCCG CCCCGAGGAC GCGCACGAGG AGCACCTGCG CCTGCTCGAC TGGGAGAAGG AGATGCTCGC CAAGGTCGAG CTGCCCTACC GGGTGATCGA CATCGCGGGC GGCGACCTGG GCGTCTCGGC GGCCCGCAAG TTCGACTGCG AGGCGTGGCT GCCCACCCAG GGCCAGTACC GCGAGGTCAC CTCGACCTCC AACTGCACCG GCTTCCAGGC CCGCCGCCTC GCCGTGCGCT ATCGCGACAA GGACGGCAAG CCCCAGCACG TGGCCACGCT GAACGGCACC CTGGCCACCA CCCGCTGGAT CGCCGCCATC CTGGAGAACC ACCAGCAGGC CGACGGCTCC GTCGTGGTCC CCAAGGCCCT GCGCCCCTAC GTCGGCCTCG ACGTCCTCGA ACCCGTCAAG TAA
|
Protein sequence | MIDLRTLRED PDRLRASQRA RGEDDSVVET LLDLDSRRRG ALSRFETLRA EQKSIGKTVS RASGDEKAAL LDRAKDLAAQ VKSAESEAEK LAGELDNLLY TVPNLVEEGA PAGGEDDFVL IEEVGEKPSF DFEPKDHLEL GELLGAIDME RGAKVSGSRF FFLRGVGARL QLGLLNMAMQ QAIEAGFIPM IPPVLVKPES MKGTGFLGEH ASEVYHLPED DLFLVGTSEV PMAAYHADEI LDGGSLPYRY AGWSTCFRRE AGSYGKDTRG IIRVHQFDKV EMFSYTRPED AHEEHLRLLD WEKEMLAKVE LPYRVIDIAG GDLGVSAARK FDCEAWLPTQ GQYREVTSTS NCTGFQARRL AVRYRDKDGK PQHVATLNGT LATTRWIAAI LENHQQADGS VVVPKALRPY VGLDVLEPVK
|
| |