Gene Sros_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0127 
Symbol 
ID8663392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp129400 
End bp131322 
Gene Length1923 bp 
Protein Length640 aa 
Translation table11 
GC content72% 
IMG OID 
ProductOsmosensitive K+ channel histidine kinase-like protein 
Protein accessionYP_003335925 
Protein GI271961729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACGA AAGTGCCAAG ATCAGGCTGG TTGACGCGGC ACTATGGATG CGTGGGTGAC 
AACAGGGCCG CCAGTGACGA CGGCATCGGC CGTGCGGTCA TCGCCGGTGC GCCCAACGCG
ATCGTCGCCA TCGACCGGGA TCAGGCGGTC CTGACGTGGA ATCCCGCCGC CGAGCGGCTG
TTCGGCTGGT CCGCCGGGGA GCTGCTCGGC CGCCGGGTCC CGCTGGTCCC CGAGGAGCTG
ACGGCCGAGC ACAACGCGGT CCTGGAACGG GTCCGCACCG GTGGCCAGGT CTCGCTGCGG
ACCAAGCGGT TCCGCCGGGA CGGCAGCCTG ATCGACGTGC GGGTCGACAC CAGCGCGCTC
CGCTCCGAGG CGGGGGTCCT GCTCGGCTAC GTCAGTGTCT ACCACCTGAC CCAGGACGAC
GAGACCGCCC ACGACCGGGT GGCCCGCCGG GCGCAGCTCG TCCGCAGGCT CACCGACGTG
GTCGCCGACA TCAACGCGGA GCGGGAGCTG CCCGCCGTGC TCGACCGGAT CGCGGCCAGC
CTCGCCGAGC TGACGGGGGC CGACGCGGGC GGGTTCGTGC TCATCGAGGG CGACCGGGTC
CGACTCGTGG CCAGCCACCG GCTCCCCGGC TCGCTGCGCG ACTCCACCGC CGACCTCCGT
ACGAGCCTGG TCGGCAAGCT CCTGCGCACC GGCAGGACAG TGATGCTGGA GACCGGCGAC
CAGGCCCGGC TGGACGAGCT GATCTGGTCG CAGCTCCCCG GCCTGCACAC CATCGCGCTC
GGCGTCGCCG CGGTGGGCGG CCGGCCGTAC GGCGCGCTGT ACGCCCTGTT CGCCAAGCGC
AAGGCCGGCC ATGTGGAGCT GGAGCTGCTC GAACTGCTCG CCGGGCACGC CGGGATCGCC
GTCGCCAACG CCATGGCCTA CCAGGAGGCC GTACGGCAGC GCGCCCACGA GCGGGCCGTG
TTCGACGCCA GCGCCGACGG CATCGCGGTC CTCGACGGCG CGGGCCGGGT CATCCAGTGG
AACCCGGCCG CCACCGAGCT GACGGGCTTC CACGCGGCCG AGGTGATCGG CGGGCCGCCG
CCGTTCCAGC TGCCGGAGCC GGGCGACAAG CTCACCCTTC AACTGCCCTC GGGCGCCTGG
CTGGACGTGC TCTGCGCCGA GATCGTGGAG ACGGGCGAGA TCGTGGTCGA CTTCCGCGAC
ATCACCCGGG CCAAGGAGCT GGAGGAGGCC AAGGACCTCT TCCTCGCCAC CACCAGTCAC
GAGCTGCGCA CCCCGATCAC GGTGGTCCGC GGCTTCGCCG GCACGCTCGA CTCGCGCTGG
GACAACATGA CCGACGCCGA GCGGCGCGCG GCCGTGCACA CCATCGCCGA GCGGGCTCGC
TCCCTCGGCC AGCTCATGGA CCACCTGCTG CTGGGCTCCC GTGCCGGGGC GGGTGAGCTC
ACCCTCAGGA TCGAGGGGTT CGACCTCGGC GAGCTGCTCC GGGCCGCCAC GCTGGGCCTG
CCGGTCCTGT CGGACCTGCA CCGGGTCGAG GTGAGCATCC CCGAGGATCT GCCCTCGGTC
TCCGGCGACG CGCTCGCCAC CGACATCATG CTCGGCCAGC TCCTGGAGAA CGCGTTCAAG
TATTCGCCGG ACGGCGGCCT CATCAGGGTC GAGGCCTGGG CCGCCGGCGA GCGGGTGATA
GTGGTCGTGG ACGACGAGGG CGTGGGCATC GACCCGGCCA GCAGGGAGCG CGTCTTCGAA
CGCTTCGTCC AGGGCGACAG CGGCGACCGC CGCCGGTTCG GCGGGGTCGG CCTCGGTCTT
TACATCGTGC GCAGCCTGGC CCAGGCCCAG GGAGCCGAGG TGTCGGCCCA CCCTCGTCCG
GGGGGCGGCA CCCGCATGAG ACTGGCCCTG CGCATTGCCG ACACGCCAGG CGCCCTTACC
TAA
 
Protein sequence
MRTKVPRSGW LTRHYGCVGD NRAASDDGIG RAVIAGAPNA IVAIDRDQAV LTWNPAAERL 
FGWSAGELLG RRVPLVPEEL TAEHNAVLER VRTGGQVSLR TKRFRRDGSL IDVRVDTSAL
RSEAGVLLGY VSVYHLTQDD ETAHDRVARR AQLVRRLTDV VADINAEREL PAVLDRIAAS
LAELTGADAG GFVLIEGDRV RLVASHRLPG SLRDSTADLR TSLVGKLLRT GRTVMLETGD
QARLDELIWS QLPGLHTIAL GVAAVGGRPY GALYALFAKR KAGHVELELL ELLAGHAGIA
VANAMAYQEA VRQRAHERAV FDASADGIAV LDGAGRVIQW NPAATELTGF HAAEVIGGPP
PFQLPEPGDK LTLQLPSGAW LDVLCAEIVE TGEIVVDFRD ITRAKELEEA KDLFLATTSH
ELRTPITVVR GFAGTLDSRW DNMTDAERRA AVHTIAERAR SLGQLMDHLL LGSRAGAGEL
TLRIEGFDLG ELLRAATLGL PVLSDLHRVE VSIPEDLPSV SGDALATDIM LGQLLENAFK
YSPDGGLIRV EAWAAGERVI VVVDDEGVGI DPASRERVFE RFVQGDSGDR RRFGGVGLGL
YIVRSLAQAQ GAEVSAHPRP GGGTRMRLAL RIADTPGALT