Gene Sros_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0117 
Symbol 
ID8663381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp118270 
End bp119010 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID 
ProductFHA domain-containing protein-like protein 
Protein accessionYP_003335915 
Protein GI271961719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.332756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAGTCC TTCAGCGCTT CGAGCGGAGG CTCGAAGGCT TGGTTGAGGG AGCCTTTGCG 
CGGGCGTTCA AATCTGACCT TCAGCCGGTC GAGGTGGCCA GCGCGGTTCA ACGCGAGATG
GACGAACGTG CGGCGATCGT CGCCCAAGGG CGCACGCTCG TGCCGAACGA CTTCGTGGTC
GAGCTGTCCA CCACGGACAG CGAGCGACTG GAGGTCTACG CGGACAGCAT CAGCCTTGAA
CTGGCCAACC TCGCCAGGGA GTACGCCAAG GAACAGGGCT ACTCCTTCGT GGGACCGGTC
CGGGTGCGTT TCGAGACGGC CGACGATCTG GCGGTCGGTC TGTTCCGGAT CCGCTCCGGC
GTGATCCGCG GCGCGACCGT CGAACAGGAC GAGATCCGCC AGCCGGTGAG CGACGTGCCG
GCGGCCAAGC CGCACGCCTT CGGGGGCCGC CCCCGCCTGC TGGTCTCGAC CCAGGACGAC
CCGCAGGGCC AGCGGTCCTA CGACCTGACC ACCCCGGTGA CCCTGCTCGG CAGGGGCACC
GACTGTGATC TACGGCTGGT CGATCCGGGT GTGTCACGGC ACCACGCCGA GCTGCGCGTG
GAGGGCCCCC AGGTCGTGCT CGTCGACCTC GGCTCCACGA ACGGCACCTT CGTCAACGGC
CAGCCGGTCC GCCGGGTCGA GCTCCAGAAC GGCACTCGCG TGACGCTGGG GCGGACGACT
CTGGTTTTCC GGCGCGATTA A
 
Protein sequence
MGVLQRFERR LEGLVEGAFA RAFKSDLQPV EVASAVQREM DERAAIVAQG RTLVPNDFVV 
ELSTTDSERL EVYADSISLE LANLAREYAK EQGYSFVGPV RVRFETADDL AVGLFRIRSG
VIRGATVEQD EIRQPVSDVP AAKPHAFGGR PRLLVSTQDD PQGQRSYDLT TPVTLLGRGT
DCDLRLVDPG VSRHHAELRV EGPQVVLVDL GSTNGTFVNG QPVRRVELQN GTRVTLGRTT
LVFRRD