Gene Sros_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0053 
Symbol 
ID8663316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp55525 
End bp56703 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003335854 
Protein GI271961658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTGT TCACGTGTGC GGGCTGTGAT GCCTCGCTGA CCTTACCCGT GTCGAATGTC 
GCGCTCCCCG CTCACGCCCA TCAGAAGTAC GGCCACGAAC TACTTCCCGT GCTCATGGAG
CCTGGGACCT ACGCGGTGAA TCCGGAACCC TCCGGGCCGC CGTGGCGGCG GTGGGAGAAG
ATCGGCGCGG AGGAGGCAGA AGCCCGTGGT GTGTACGCGC CGACCTACGC CCTGTCGTAC
GGGCCGCCGG GGGCGGTCGC GGTCGCGCTG GGTGACGTCC GCGGGACCGT TCTGATTCCG
GAGCGGTGCG ACGGCCTCTG CTGCGGTCTG GACAGCAGAA ACGGCCCCAA CCTGGCGTGC
GCGCAGTGCG GGCATGCCGT GGCCACCCTC ATCGACGACT GCTCGTACTG GCAGGTGGTG
TGGCTGGACC CGCGCGCCGT ACGTCTCCTC GACGTCGATG CGCCCGCCCG CCGAGTGCTC
AGCTGGGAGG AACTACGGGA ACAGCCGGAG AGACCGCCGG TTGAACCGAT CGGGGCCTGG
AGCCCGGTGT GGGAGGCAGC GGTCTCGGTG GCGCTGGCCC ACCTGCTGGC CGCGTCGGGC
GGTGCACGGG TCGTGGTTCC CGATGGCCCT GTCGCCGATG CGTTCCGTCC GGCGCTCGAT
GCCCTGCTCC CGGCCGAGCC GCCGACGAGG AGCCTGGCCC TGGCCGGGCC GGGCCTGCCC
GCCACCGTCA CGGACATCGC TTTGGTTCCG CAGCACCCGC AAACTGGGGA GACATGGTCG
TCCGGCACCG TCACGGACAT CGCTTTGGTT CCGCAGCACC CGCAAACTGG GGAGACATGG
TCGTCCGGCA CCGTCACGGA CATCGCTTTG GTTCCGCAGC ACCCGCAAAC TGGGGAGACA
TGGTCGTCCG GCACGGAGGC AGCGGTGCCG CTGGCTGCCG ATGTATGGAT GTATATGGCC
TTCAGTCGTA ATCGGCGGCT TCGCCCCGCG TCGGGCGGGC TGCCCGACGG CGTCTACCGC
GATGACCCTC CACCACCGCT GCCGTCCAGC CCGTTCCGGC TCGACCGGCA GATGTTCCTC
CACGCGCTGG CACGACTGCC GGAGGTTCGT CAGCCATGGC TGCGTGCGGT TTACGACGAC
GTGCAGGACC GCCGATCCAA CCTCCCGTTC TGGTGGTGA
 
Protein sequence
MIVFTCAGCD ASLTLPVSNV ALPAHAHQKY GHELLPVLME PGTYAVNPEP SGPPWRRWEK 
IGAEEAEARG VYAPTYALSY GPPGAVAVAL GDVRGTVLIP ERCDGLCCGL DSRNGPNLAC
AQCGHAVATL IDDCSYWQVV WLDPRAVRLL DVDAPARRVL SWEELREQPE RPPVEPIGAW
SPVWEAAVSV ALAHLLAASG GARVVVPDGP VADAFRPALD ALLPAEPPTR SLALAGPGLP
ATVTDIALVP QHPQTGETWS SGTVTDIALV PQHPQTGETW SSGTVTDIAL VPQHPQTGET
WSSGTEAAVP LAADVWMYMA FSRNRRLRPA SGGLPDGVYR DDPPPPLPSS PFRLDRQMFL
HALARLPEVR QPWLRAVYDD VQDRRSNLPF WW