Gene Sros_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0050 
Symbol 
ID8663313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp53232 
End bp54239 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003335851 
Protein GI271961655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCATCC CTATATCCCC TGTGTCTCCC CGTTACCCCG ATCACGCCGC GCCGAGACGG 
CTCCGTCGCC TGATCCTGGC GACCGCTCCT CCGCTGCTCC TCCTGGTCGT ACCCATGGTC
CTGGTCGCCT TGTACGGCGA GCGCCTTCCC GACCGCGTCT ACATCGGCAA CTGGGCCATC
GACACCAAAT ACGAGCCCAC CTGGCAAGGC TGGACCTCGC AACCCCTCTT TGGGGCGGTG
ATGTGGTGTG AAGCACTGCT CGTCTTCTCG TTCCTGCGCT ACTGGCGCCT GCCTCAAGTC
CAGCGGGGCC TGGTGGTCGG CAGTTTCCTC ATCGGCGTGG CCGTTCCGGT GTCCGGCGCA
TTGTGGCTGC TGGCGCTGGT CGACGCACCG GGCGTCGTGG CCCGGCCCGC CTGGCACCTG
GCGGTGGAGA TCGCCGTCAC CGCAGGGGCG CTCGCGCTGG GCTGGGCAGC GGCGGGTCCG
CTGCCGCCGA CGCCCGTGGT CACCGCCACA CCACCGCCGC ACGCGCCCAC CATGACACTC
GGCCCGTGGC AGCGCGCCAT GTTCGTGACT TCCACCTGGT CGGCACGCAG GCTGCTGGTC
GCCGCGGTGA TGGCCGCGCT CACCGCGTGG GCCGTGTCCA ATGGCTTCGG CGGATGGCAG
GGTATGGCCT TGCTGGCACT GTTGACGATC TTCGAGGCGG CGCAGGCGCG CACCCACCTG
CAGATCGACG GCTCGGGCAT CACCGTGAGC CTCCCCTGGC TGCCCGTCCT GCACCGGACG
GTGCCGTACC CGAAGGTACG GTTCGCCGAG GCCATGAGCG AACCTCTCCC TGGGCGATAC
AAGCTGGACG ACGGGGAGGC AGGCTGGGGC ATCGTCAGCG GGAAGGGACC AGTGCTCGCC
TTGTCGCTCA GTGACGACCG GTGGTTCCTC TACTCCACGC GTGAAGCGGA AACGGCGGCC
GCGCTGATCA ACGGATGGTT GAGCAGGCAA CGACAGGAGA CGGCGTAG
 
Protein sequence
MFIPISPVSP RYPDHAAPRR LRRLILATAP PLLLLVVPMV LVALYGERLP DRVYIGNWAI 
DTKYEPTWQG WTSQPLFGAV MWCEALLVFS FLRYWRLPQV QRGLVVGSFL IGVAVPVSGA
LWLLALVDAP GVVARPAWHL AVEIAVTAGA LALGWAAAGP LPPTPVVTAT PPPHAPTMTL
GPWQRAMFVT STWSARRLLV AAVMAALTAW AVSNGFGGWQ GMALLALLTI FEAAQARTHL
QIDGSGITVS LPWLPVLHRT VPYPKVRFAE AMSEPLPGRY KLDDGEAGWG IVSGKGPVLA
LSLSDDRWFL YSTREAETAA ALINGWLSRQ RQETA