Gene Sros_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0025 
Symbol 
ID8663288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp26497 
End bp27105 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003335828 
Protein GI271961632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0014866 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.629454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAC CGATGCACCA TATGGATCAC GCCGGACATG GAGAGCACGG TGGGCACCAC 
GGCCATGATT CACATGCGCA GGCGGGTCCC TCTCACGCTG GCCACTCTCA CGCGGGTCCT
TCTCACGCTG GTCCCTCTCA CGCGGGCCAC TCTCACGCTG GTCACTCCGG GAAGGTGACG
TGGCGGGCGG CCGCGTCGGC GACCCTGCAC TGCCTCACCG GATGCGCCAT CGGCGAGGTG
CTCGGCATGG TCATCGGCAC GGCCCTGGGC TGGTCCAACG CGGCGACCAT CGTCCTGGCC
GTCGTGCTGG CCTTCTTCTT CGGCTACGCC CTCACCATCG TGGGACTACG CAAGTCCGGC
CTCGGCTGGC GCCGGATCGT ACGGCTGGCA CTCGCCGCCG ACACCGTGTC GATCATCGTC
ATGGAGATCG TCGACAACGG CGTGATGATG GTGGTGCCCG GCGCCATGGA CGCCGGGCTC
GCCTCGGGCC TGTTCTGGGG CGCCCTCGCG TTCGCCCTGC TGGTGGCCTT CCTCATCACC
ACCCCGATCA ACAAGTGGAT CATCGGCAAG GGCAAGGGGC ACGCGGTGGT CCACGCCTAC
CACCACTGA
 
Protein sequence
MSEPMHHMDH AGHGEHGGHH GHDSHAQAGP SHAGHSHAGP SHAGPSHAGH SHAGHSGKVT 
WRAAASATLH CLTGCAIGEV LGMVIGTALG WSNAATIVLA VVLAFFFGYA LTIVGLRKSG
LGWRRIVRLA LAADTVSIIV MEIVDNGVMM VVPGAMDAGL ASGLFWGALA FALLVAFLIT
TPINKWIIGK GKGHAVVHAY HH