Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_0009 |
Symbol | |
ID | 8663271 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 12533 |
End bp | 13180 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003335814 |
Protein GI | 271961618 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.994144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAAGG CCACTGAAGC GGACGCCGTC GATGTGGCCG AGTCCCCGGC TGACGGTAGC AAGCCCACGC CGGAGACCGA TAAATCGGTA ACCGACGACT TCAAGGGCAG GCAGAACGTG ACAGCGATCG AGGACGGCAA GCCAAGCGAC TCCACGGTGC GCATCCGCCC GCGGTCCGCG GAGACCGACA GCTCCTCCTG GGCTCCGGGA GGCCTGTCGT CCCCCGCGCC TGAGGCGCCG GGCAGGAAGG CGGCCGACCC CTCTCCCCGG GCGCCGCGCA AGGCCCACCT GGTGCTGCGC CGGATCGAGC CCTGGTCGGC CATGAAGTTC AGCTTCGTGG TCTCCCTGGT CTGCTTCGTC GTGCTGTTCG TCGCGGTCGC GGTGCTCTAC ATGGTGCTGT CCGGCCTGGG GGTGTTCGAC AACATCATCC AGACGGTGAA CCAGCTCACG ACGGCCGACG GCAAGTCCAC CAGCGGGGTG GACGTCGCCT CCTGGTTCGA GCCGGTCCGC ATCCTCGGCT ACACCGCTCT GATCGGCGCG GTGAACGTGG TGCTGATCAC CGCCCTGTCC ACCCTCGGCT CGGTGATCTA CAACATCGCC TCCGACCTGG TCGGCGGCGT GGAAGTCACC TTCAGCGAGG CCGAGTAG
|
Protein sequence | MDKATEADAV DVAESPADGS KPTPETDKSV TDDFKGRQNV TAIEDGKPSD STVRIRPRSA ETDSSSWAPG GLSSPAPEAP GRKAADPSPR APRKAHLVLR RIEPWSAMKF SFVVSLVCFV VLFVAVAVLY MVLSGLGVFD NIIQTVNQLT TADGKSTSGV DVASWFEPVR ILGYTALIGA VNVVLITALS TLGSVIYNIA SDLVGGVEVT FSEAE
|
| |