Gene Sros_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_0007 
Symbol 
ID8663269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp7964 
End bp9907 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content67% 
IMG OID 
ProductDNA topoisomerase (ATP-hydrolyzing) 
Protein accessionYP_003335812 
Protein GI271961616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCTACG ACGCTAGCTC AATCACCGTC CTCGAAGGAC TCGAGGCGGT CCGTAAGCGC 
CCAGGTATGT ACATCGGCTC GACCGGCGAG CGCGGTCTCC ACCACCTCGT CTACGAGGTC
GTGGACAACT CCGTCGACGA GGCGCTGGCC GGCCACGCAG ACCGCATCGA GGTCACCCTG
CTCGCCGACA ACGGCGTGCG GGTCGTGGAC AACGGCCGGG GCATCCCGGT CGGCATCGTC
GAGGCGGAGG GCCGCCCGGC CGTCGAGGTC GTCCTCACCG TGCTGCACGC GGGCGGCAAG
TTCGACAGCA AGTCCTACGC GGTCTCCGGC GGCCTGCACG GCGTGGGCGT CTCGGTGGTG
AACGCCCTCT CCAGCAAGCT GGAGGTGGAG ATCCGCACCG ACGGGCATCA CTGGCAGCAG
AGCTATGCCG AGACCCGGCC GCTCCACCCC CTGGTCAAGG GGGAGGCGAC CGAGGAGACC
GGGACCTCGA TCACCTTCTG GGCCGACTCG ACGATCTTCG AGACCACCAC GTGGAACTTC
GAGACGCTCT CGCGCCGCTT CCAGGAGATG GCCTTCCTCA ACAAGGGCCT GACGATCTCC
CTGCGCGACG AGCGGCCCGA CCACATCAAC GGCGAGCCCA AAGAGGCGAC CTACCACTAC
GAGGGCGGCC TGTCCGACTT CGTCAAGCAC CTCAACTCCA AGAAGGAGCC CGCTCACGTC
TCCGTGATCG ACTTCGAGGA GAGCGGCGAG GGGATCTCGG TCGAGATCGC CATGCAGTGG
AACAACTCCT ACAGCGAGTC GGTCTACACC TTCGCCAACA CGATCAACAC GGCCGAGGGC
GGCACCCACG AGGAGGGCTT CCGCGCGGCG CTGACGTCGA TCGTCAACCG CTACGCGCGC
GAGCAGAAGT TCCTCAAGGA GGGCAAGGAC GACAACCTGG CCGGTGAGGA CATCCGTGAG
GGCCTCACCG CGATCATCTC GGTGAAGCTG GCCGACCCGC AGTTCGAGGG CCAGACCAAG
ACCAAGCTGG GCAACACCGA GGCCAAGTCG TTCGTCCAGA AGGCCTGCAA CGACCACCTG
CGCGACTGGT TCGAGCGCAA CCCCGGCGAG GCCAAGGACA TCATCAACAA GTCCCTGCAG
GCCTCCCGCG CCCGTCTGGC CGCCCGCCAG GCCCGCGACC TGACCCGGCG CAAGTCGCTG
CTGGAGTCCG GTTCCGGTCT GCCCGGAAAG CTGGCCGACT GCCAGTGGAG CGACCCCGAG
AAGTGCGAGC TGTTCATCGT CGAGGGTGAC TCGGCGGGCG GCTCGGCCAA GGGCGGCCGC
GACTCCAAGT TCCAGGCGAT CCTGCCCATC CGAGGCAAGA TCCTGAACGT GGAGAAGGCG
CGCATCGACA AGGTGCTGCG GAACACCGAG GTCCAGGCGC TGATCACCGC GATGGGCACC
GGCGTCCACG ACGAGTTCGA CATCACCAAG CTCCGCTACC ACAAGCTCAT CCTGATGGCC
GACGCCGACG TCGACGGCCA GCACATCAAC ACGCTGCTGC TGACGCTGCT GTTCCGCTTC
ATGCGGCCGC TGATCGAGGC CGGGCACGTC TACCTCTCCC AGCCCCCCCT CTACAAGATC
AAGTGGGACC GCCGGGGCGA GGACGCCTCC TACGCCTACT CCGACCCGGA GCGCGACGCG
ATCATCGCGG ACGGCATCGC CCGCGGCAAG CGCGACCCGC GCATGCACGA CGGCATCCAG
CGGTTCAAGG GTCTGGGCGA GATGAACGCC TCCCAGCTCT GGGAGACCAC GATGAACCCC
GAGACCCGCG TCCTGCGCCT GGTCACCCTC GACGACGCCG CCCAGGCCGA CGAGCTGTTC
AGCGTTCTCA TGGGTGAGGA CGTCGAGGCC CGCCGCTCCT TCATCATCAG GAACGCGCGA
GACGTCCGAT TCCTCGATGT GTAG
 
Protein sequence
MSYDASSITV LEGLEAVRKR PGMYIGSTGE RGLHHLVYEV VDNSVDEALA GHADRIEVTL 
LADNGVRVVD NGRGIPVGIV EAEGRPAVEV VLTVLHAGGK FDSKSYAVSG GLHGVGVSVV
NALSSKLEVE IRTDGHHWQQ SYAETRPLHP LVKGEATEET GTSITFWADS TIFETTTWNF
ETLSRRFQEM AFLNKGLTIS LRDERPDHIN GEPKEATYHY EGGLSDFVKH LNSKKEPAHV
SVIDFEESGE GISVEIAMQW NNSYSESVYT FANTINTAEG GTHEEGFRAA LTSIVNRYAR
EQKFLKEGKD DNLAGEDIRE GLTAIISVKL ADPQFEGQTK TKLGNTEAKS FVQKACNDHL
RDWFERNPGE AKDIINKSLQ ASRARLAARQ ARDLTRRKSL LESGSGLPGK LADCQWSDPE
KCELFIVEGD SAGGSAKGGR DSKFQAILPI RGKILNVEKA RIDKVLRNTE VQALITAMGT
GVHDEFDITK LRYHKLILMA DADVDGQHIN TLLLTLLFRF MRPLIEAGHV YLSQPPLYKI
KWDRRGEDAS YAYSDPERDA IIADGIARGK RDPRMHDGIQ RFKGLGEMNA SQLWETTMNP
ETRVLRLVTL DDAAQADELF SVLMGEDVEA RRSFIIRNAR DVRFLDV