Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_916 |
Symbol | ssb |
ID | 8657848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 849529 |
End bp | 849936 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | single-stranded DNA-binding protein |
Protein accession | YP_003330364 |
Protein GI | 270308306 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000000232202 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTGAGTT TGAATAAGGT TATGATAATT GGCAATGTTG GCGGTGAGCC GGAGATGCGG TATACCCCCA GCGGGCATCC TGTTACCTCC TTTAAAGTTG CTACCAACTG GGTTTATAAT ACCCCCGAGG GTGAACGCAA ACAGGAAACT GAATGGTTTA CGGTAGTTGC TTGGAACAAG CTGGCTGAAC AGTGCAACCA GTTCCTTTCC AAAGGGCGGC TGGTGTACGT GGAAGGACGG CTTCGCACCC GAAGCTGGGA AGGACAGGAT AATCTGAAAC ATTACCGTAC CGAGGTAATT GCTTCCAGGG TTACCTTCCT TGAGAAAGCC AGTGCAGGTA CCGGGATGGA TGCCCGTGAT GATGACAATG GCGGCGGTGA ATTAGAACCG GAAGACATTC CGTTTTAG
|
Protein sequence | MVSLNKVMII GNVGGEPEMR YTPSGHPVTS FKVATNWVYN TPEGERKQET EWFTVVAWNK LAEQCNQFLS KGRLVYVEGR LRTRSWEGQD NLKHYRTEVI ASRVTFLEKA SAGTGMDARD DDNGGGELEP EDIPF
|
| |