Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_909 |
Symbol | |
ID | 8657841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 845594 |
End bp | 846274 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | RNA-binding protein |
Protein accession | YP_003330357 |
Protein GI | 270308299 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000072438 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGG TCGAGACGAG CGCCAAGACG GTGGAGGAAG CAATAAAACT GGGGCTAAAT CAGCTAAACG TAAGCCGAGA CGAAGTTGAG ATAGAGGTAT TGTCTGAGGG CAGGCATGGG TTACTGGGTC TGCGCGGGGA AGATGCAAGG GTTTGCCTGC ATCTTATTGA AAATGAATAC GATGATGATA TTGCGCCGGG TAACCAGATG GATGCAGGCG ATCTGGCACA AAATATTCTG GAAACCCTGC TGGACAAGAT GGATATCGAA GCCTATGTAG ATATCCTGCC GGAAAAAATG GTTACCGATG AGGAATCACA ACCGAGTACT GTTTTGAACA TTGTGGGCGA AGATCTGGGT ATCCTGATAG GACGCAAGGG TCAGACTCTC ATAAGTTTGC AGCAAGTGGT AAGGCTGATG CTGTCTCACC AGCTGGGCAG GTTTGAACCG GTGGTAGTTG ACGTAAACGG TTACCGGCAA CGCCGCCTAA GTTCCCTTCA GGCTTTGGCT TGGAGAACAG CCGAACAGGT AAAATTGCGG CGTATGCCTT TTTCACTTGA TCCTATGCCT GCTTATGAAC GGCGGATTAT TCATCTGGCA TTAGCTGATG ATGACGAAGT GACTACTCAG AGCGTTGGCT TCGGTGAATC AAGAAAAGTT GTGGTAGTTT TAAAAGAATA G
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Protein sequence | MKKVETSAKT VEEAIKLGLN QLNVSRDEVE IEVLSEGRHG LLGLRGEDAR VCLHLIENEY DDDIAPGNQM DAGDLAQNIL ETLLDKMDIE AYVDILPEKM VTDEESQPST VLNIVGEDLG ILIGRKGQTL ISLQQVVRLM LSHQLGRFEP VVVDVNGYRQ RRLSSLQALA WRTAEQVKLR RMPFSLDPMP AYERRIIHLA LADDDEVTTQ SVGFGESRKV VVVLKE
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