Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_875 |
Symbol | |
ID | 8657807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 810537 |
End bp | 811526 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003330327 |
Protein GI | 270308269 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.929392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTATATA TTTTTAAAAA AATTGAGCTT GGCGAATTGA GCCGTGATTT TGATACTGTT TCACAAGGGG TAAATATTAC TTATCCGTTT ATTCATCCCG GCTGGCAGTA TCTCTGGCAA GATTGTTTTT TGCCATCCGG CAGGCAGGTT TGCGGACTGG TTAACGATGG GGATGAAACT ATAGGCTTAG TAGCCTTGAG TATAAATAAT GGAATTGCCC GTTTTATAGC TGACGGGAGT GTTTTTGATT ATCTGGATTT TGTGGTAAAG CCCGGTCACC AGTCGGGATA TTTTGAGCTT CTGCTGAAAC TGTTACAGCA AAATCAAGTT GAGACGCTGG AATTGGAGGC ACTTACTGCC CGGTCTGAAG CTTATAATTA TCTGCTGCCG CTGGCTAAAA AGAAAGGGTT TCAGGTAATT TGTGAACAAG CTGATGTTTC TCCGTTGCTT GAGCTGCCGA ATGACTTTGA AATATATCTG GCTCAACTAG AAAAACACCA ACGCCACGAG CTTAAACGTA AACTCCGCCG TCTTGAGGAA GTTTTAACAC CCGGACTGGA AATAGAAACC AACTCTGAAA ATATTGATAT TTTGCTTGAC CAAATGGAAG AAAGTCACCC CGAGAAAGCA CTTTTTCTAT CTTCTGAAAT GCGTTGTTAT TTCAAAAGCC TGGCAAAATG GCTTGGTAGT CAGGGTTACC TGCGTTTGGC GTTTCTAAAG GCAGGAGATA CTGTTTTGGC AAGCCTGTTT TGCTTTGATT ATAATAATAT AAGATATTTG TATAACAGCG GTTACAGTGT CGAGTATTCC CACCTAAGCG TGGGTGTGCT TTCCAAGGTT TTGGCTGTCA AAGACGCAAT AGAAAAAGGC TGTGATGCCT TTGATTTCCT GAGGGGCGAA GAAAAGTACA AATTTCATTT GGGCGGAAAA TCTCAGCCGG TTCACAAGTG CCGGATAATT TTGGATAGTA AGGTGCAAAA TATTGGCTAA
|
Protein sequence | MVYIFKKIEL GELSRDFDTV SQGVNITYPF IHPGWQYLWQ DCFLPSGRQV CGLVNDGDET IGLVALSINN GIARFIADGS VFDYLDFVVK PGHQSGYFEL LLKLLQQNQV ETLELEALTA RSEAYNYLLP LAKKKGFQVI CEQADVSPLL ELPNDFEIYL AQLEKHQRHE LKRKLRRLEE VLTPGLEIET NSENIDILLD QMEESHPEKA LFLSSEMRCY FKSLAKWLGS QGYLRLAFLK AGDTVLASLF CFDYNNIRYL YNSGYSVEYS HLSVGVLSKV LAVKDAIEKG CDAFDFLRGE EKYKFHLGGK SQPVHKCRII LDSKVQNIG
|
| |