| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_857 |
|---|
| Symbol | nusA |
|---|
| ID | 8657789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 798275 |
|---|
| End bp | 799738 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | transcription elongation factor |
|---|
| Protein accession | YP_003330312 |
|---|
| Protein GI | 270308254 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000272174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCG ACTTTTTGCT CGCTATCACC CAGCTCTCGG CAGAGAAGAA TCTGCCAAAA
GAAGTAGTAC TTGCTACCGT TGAGTCGGCA TTGGTATCGG CTTATCGTAA AGAGAGCTTT
GCTCCAAACC AGAATATCAC GGTGAAAATA GACCCGCTTA CCGGTAAGGT AAAAGTCATG
GCCGAAAAGC AGGTAGTTGA AAAAGTGATT GACAGCCGCC AAGAAATGCG TTTGCTTGAG
GCTAAACGGC AAAAAGCAGA TGCAAAAATA GGCGACCTGA TGATGGTTGA AGATACTCCG
GCTGATGCCG GGCGTATTGC TGCCCAGACT GCCAAGCAGG TTATTCTGCA GCGTCTGCAT
GAGGCGGAAA ATACGGCTAT ATTTGACGAA TATGCCTCCA AGGCTGGAGA TACTCTGGTG
GGCGTAGTTC AGCGTATAGA GCCCAAACAG ATTACGGTTG ATATCGGCCG GGTAGAAGCT
ATAATGCCTG CCAGTGAACA GGCTTATGGT GAGAGGTATC GTGCCGGACA GCGGATAAAG
GTTTATGTGG TGGACGTGGC TAAAACAGCT AAAGGTCCTG CTGTCATTGT TTCCCGTTCA
CACCCCGGTC TGGTACGGCG TTTGTTTGAA ATGGAAGTAC CTGAGGTTTT TAACCAACTG
GTAGAGATAA AGGCTGTTGC CCGTGAAGCA GGCTCACGCT CTAAGGTAGC GGTAGGCGCT
TTGCAGCCGG GAATTGACCC GGTAGGTTGC TGCGTGGGTT TGCGGGGTAT ACGTATCCAA
AACATTGTCA GCGAGCTGAA CGGAGAAAAA ATAGATGTGG TGGCTTGGGA TAATGAAATA
GCCACTTTTA TTGCAAATTC ACTCAGCCCT GCCCAAGTCA CCAAAGTTAT ATTGAATGAG
GCGGAAAAAT CTGCCATTGT AGTTATACCT GACCGTCAGC TCAGTTTGGG CATTGGTAAA
GAAGGACAGA ATGTGCGTCT AGCAGTTAAA CTGACAGGCT GGCGTATTGA TATAAAGAGT
GCCTCTGACG AAGAAGTTGA ACGCGCAGAA GAAGTTGCCC GCAAGCAGGC TGAGCACATC
AAACCTGAAG CTGTTGAGAA ACAACCTGTG GCAGTACCTG TTTCAAAGAT TGAAGAGGAA
TCTGTTGGGA AACTGCCGCC TGCGGAACTA ATAATAGAAC CTGCGGTTAA AGAAACACCG
GCAAAGGTAG AAGCTGTCCC TGAAGAGCAA GGTGTGGTAG TACCTTTGAA TGTGCTTGAT
AAAGTATCCG AAGGGGATTC GGTCAAACTG CGTTTTGCGG AAGATTTGCT GCCCAGGCGC
GAAGTTATCA TTGATGACAA AAATAAAAAC AAAAACAAGA AAAAGACCGT TAAAGGCAAG
GATACCGCTG AAGATGGTAT CAAGCTGAAG GGCAAAAAAC GGCGGAATGT AACAGATTAT
GAATCAGAGG AAATCGACTT CTAA
|
|---|
| Protein sequence | MKSDFLLAIT QLSAEKNLPK EVVLATVESA LVSAYRKESF APNQNITVKI DPLTGKVKVM
AEKQVVEKVI DSRQEMRLLE AKRQKADAKI GDLMMVEDTP ADAGRIAAQT AKQVILQRLH
EAENTAIFDE YASKAGDTLV GVVQRIEPKQ ITVDIGRVEA IMPASEQAYG ERYRAGQRIK
VYVVDVAKTA KGPAVIVSRS HPGLVRRLFE MEVPEVFNQL VEIKAVAREA GSRSKVAVGA
LQPGIDPVGC CVGLRGIRIQ NIVSELNGEK IDVVAWDNEI ATFIANSLSP AQVTKVILNE
AEKSAIVVIP DRQLSLGIGK EGQNVRLAVK LTGWRIDIKS ASDEEVERAE EVARKQAEHI
KPEAVEKQPV AVPVSKIEEE SVGKLPPAEL IIEPAVKETP AKVEAVPEEQ GVVVPLNVLD
KVSEGDSVKL RFAEDLLPRR EVIIDDKNKN KNKKKTVKGK DTAEDGIKLK GKKRRNVTDY
ESEEIDF
|
|---|
| |