| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_843 |
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| Symbol | pnp |
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| ID | 8657776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 784027 |
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| End bp | 786189 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| Protein accession | YP_003330299 |
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| Protein GI | 270308241 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.946894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATAACTG CCAACTCATT TGAACGAACT ATTGGCGGCA GAAAACTTAT TATAGAGAGC
GGGAAAATAG CCCGCCTTGC AGATGCCGCA GTAACTATCC GCTATGCGGA TACCGAATTA
CTGGTAACAC TTTGTGCTGC CAAAAAACCG CGCGAAGGGG TGGATTTCCT CCCCCTGACT
ATAGACTACG AAGAGCGGAT GTATGCCGCA GGCAAAATCC CCGGCGGGTT TATCCGCCGC
GAAGGACGCC CCAGTGAACA GGCTATTTTG GCCGGACGTC TGACAGACAG ACCTCTTCGC
CCCCTTCTCC CCAAGGAGTG GCGGAATGAA CTTCAGATTA TTATCACCGT AATTGCCTCA
GACAAGGAAA ATGACGCTGA TATCTGGGGT GTGGTAGGTG CTTCAACCGT TCTCACCATG
TCACAAATAC CCTACGAAGG CCCGGTAGGA GCCAGCCGCG TAGGCTATAT CAATGGCGAA
TTCGTGCTTA ACCCCACCTT TGCCCAGCTG GAACAAAGCC AGATGGATTT AGTGGTAGTC
AGCACCCGCA AAGCCGTGGT TATGATTGAA GCCGGGTCTA AGGAAATTCC CGAAGACCTT
ATGATTAAAG CGATTGAGTT TGCCCACCAG GCAAATCAGG AGCTTATTGA CCTGCAGGAT
GAAATCCGCG CCAAGCTGGG CAAGGAAAAA CTGCCGGTGC CGGTGCTGGA AATACCTGAA
GAAGTCAAAG CAGCGGTAGC CGCCTTTGTA AAAGGGCGGG TAAACGAAGC TCTGAGCTAT
CAGGATAAAA CCCTCCGTGA AAATGCGGTT GAAGCCCTTC AGAGCGAACT GGTTGAAGCT
TTGGCAGAGA CATATGCCGA AGGCGATATT CTGGCCGCTT ATGATAAAGA AATCAAAAAG
GCTATCCGTT CAACTATACT TGAAAAAGAT ATCAGGGTAA ACGGACGGGG TATTAAACAG
CTTCGCCAGC TGGACGCTGA AACAGGTATT CTGCCCCGCG TTCACGGCTC AGCTTTGTTC
ACCCGCGGTG ATACCCAGGT TATGGCCGTT ACCACTCTGG GTTCTTTACA GGAATCCCAG
CAGCTGGATG GCTTGAGTGC CGAAGATACC AAGCGTTTTA TGCTTCACTA CAATTTTGCC
CCCTTCTCTA CCGGTGAAGT TAAGCGTTCC GGCTCCCCCG GACGGCGTGA AATCGGCCAT
GGTGCTTTAG CCGAAAGGGC TTTGGTGCCT GTCCTGCCCA CTCCCGAAGA ATTTCCCTAT
ACCATTCGTA TGGTAGCTGA CGTAGTCGGT TCATCAGGCT CTACTTCTAT GGGCAGTGTC
TGTTCGTCCA GTTTGTCACT TATGGATGCA GGCGTACCCG TCAAAAAAGC TGTTGCCGGT
ATCTCCATCG GCCTTATTAC CGGTGAAAAT GATACCTACT GCACCATTAC TGACATTGAA
GGTATTGAAG ATAACTACGG CGATATGGAT TTCAAAGTTG CCGGTACCCG TGACGGCATA
ACCGCCATAC AGGTGGACAT GAAGGTCAAG GGTATCAGTT TTGACGTTAT CCGTGACGCT
ATCTACCAGG CCAAAGAAGC CCGCTATAAC ATACTGGAAG TAATGGACAA GGCTCTTGCC
CAGCCCAAGA CCGAGCTTAG CCCTTACGCC CCCAGAATGT ACAAGATAAG CATTGACCCC
TCCAAGATTG GCAGTGTTAT CGGCAGCGGC GGCAAGACTA TCCGCTCTAT TATTGAGCAG
ACCAATACTA CCGTTGATAT TGAAAATGAC GGCACAGTGG TTATCGGCGC TACTGACGAA
GCTTCGGCCC AAAAGGCTAT CAAGATAATT GAAGACCTGA CTAAAGATAT TGAAGCCGGC
AGTGTTTACA CCGGTAAAGT TACCCGGATA ATGACCTTCG GTGCTTTCGT TGAAATCCTG
CCCGGCAAGG AGGGCATGGT ACATATAAGC GAACTGGCTG ACCACAGAGT AGAAAAAGTG
GAAGATATAG TCAAGGTTGG TGATGAAATA ACGGTAAAAG TTACCGAGAT TGATTCCCAA
GGCAGAGTAA ATTTGTCACG GCGGGTCATT CTCAACCCCA ACGCCGTACC CATTTCACGT
AACCGTGATT CCCAGCCGCG TCGTTCTGGG CCTTTCCGCC CTCAAGACCG GTCCAACTCA
TAA
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| Protein sequence | MITANSFERT IGGRKLIIES GKIARLADAA VTIRYADTEL LVTLCAAKKP REGVDFLPLT
IDYEERMYAA GKIPGGFIRR EGRPSEQAIL AGRLTDRPLR PLLPKEWRNE LQIIITVIAS
DKENDADIWG VVGASTVLTM SQIPYEGPVG ASRVGYINGE FVLNPTFAQL EQSQMDLVVV
STRKAVVMIE AGSKEIPEDL MIKAIEFAHQ ANQELIDLQD EIRAKLGKEK LPVPVLEIPE
EVKAAVAAFV KGRVNEALSY QDKTLRENAV EALQSELVEA LAETYAEGDI LAAYDKEIKK
AIRSTILEKD IRVNGRGIKQ LRQLDAETGI LPRVHGSALF TRGDTQVMAV TTLGSLQESQ
QLDGLSAEDT KRFMLHYNFA PFSTGEVKRS GSPGRREIGH GALAERALVP VLPTPEEFPY
TIRMVADVVG SSGSTSMGSV CSSSLSLMDA GVPVKKAVAG ISIGLITGEN DTYCTITDIE
GIEDNYGDMD FKVAGTRDGI TAIQVDMKVK GISFDVIRDA IYQAKEARYN ILEVMDKALA
QPKTELSPYA PRMYKISIDP SKIGSVIGSG GKTIRSIIEQ TNTTVDIEND GTVVIGATDE
ASAQKAIKII EDLTKDIEAG SVYTGKVTRI MTFGAFVEIL PGKEGMVHIS ELADHRVEKV
EDIVKVGDEI TVKVTEIDSQ GRVNLSRRVI LNPNAVPISR NRDSQPRRSG PFRPQDRSNS
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