Gene DhcVS_817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_817 
Symbol 
ID8657750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp760692 
End bp762584 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content47% 
IMG OID 
ProductAMP-binding protein, long-chain fatty-acid-CoA ligase 
Protein accessionYP_003330275 
Protein GI270308217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAA TAGACACAAT ACCCAAACTG GTAAAACATA ATGCCGAACA ATGGGGCGAT 
AAGCCTGCCA TGTGTATGAA AAATCTGGGT ATATGGCAAA AATATACCTG GAGCGATTAT
TACCAGACGG TCAAATATTT CGGTTTGGGG CTGCTCAGTC TGGGGGCTAA ACCCGCTGAT
AGGGTGTCTA TTATCGGCGA TAATGAACCC GAATGGTTTT GGGCGGAATT TGCCGCCCAG
GCAATAGGTG CAATCCCCAC CGGTATATAT GTAGACTCTA TTCCTGATGA GGTTAAATAT
ATTGCCCGTC ATGCTGAAGT GAGAATAGCA GTAGTAAATG ACCAGGAACA AGCTGATAAA
TTTCTGGAGC TGCTGCCCGA ACTGCTAAAC CTTACCAAGA TTATCTACTG GGACCCCAAA
GGGCTTAAAA ACTACGATGA CCCCATGCTG GTAAGTTTTA AAGATGTGAT GAAGCTGGGG
CAGGAATACG AAAGAAGCCA TCCCGGATTA TTTGAACAAC TGCTAAGTGA TACCAAGCCT
GATGATATTG CCTTCATTTA CTACACCTCC GGTACTACCG GACTTCAGAA GGGAGCTATG
CTCAGCCACC GTTCCCTTAT CACTACCGCC AAGGGTTTTG TTGCCCGTTA CCCGCTGAAC
TATAAAGATG ACCTTATTTC AAATTTTCCT GCCTCGTGGG TAGGTGACAG TTTTTTCGCT
ACCATACCCC ATATTCTTTC CGGCGCACGC CTGAACTTTT CTGAAGAGCC GGAAACGGTT
GCTGAAGATA CTCGTGAAAT AGGGCCTAAT TTTGTTATCT ACGGCCCGCG CCAATGGGAA
AGCCTGGTAA GTGAGATACA GGTAAAAATA ATAGATGCTC ATCCCTTAAA GCGTTTGGCC
TATAAGGCAC TTTCACCTTT GGGGTATAAA ATGGCCGAAA AAACTCTGGC CGGGAGCAAG
CCCGGTCTCC CCTTGAAGAT AGGCCACAAA ATAGCTGACG GGCTGCTGTT TCACCCCTTA
AAAGATAAAC TGGGGGTCAG CAAGGTAAGA TTTGGGGTTA CCGGAAGCTC GGTGCTTTCG
CTGGATACAT TCAAAATGAT ACATTCCCTG GGTATTGAGC TAAGGCAGAA TTATGCTTCA
ACCGAAGCCG GGTTTATTTC CTCCCACGGC AAGGGCGATA TCAGCTTTGA AAGCGTGGGG
CGGCCGGCAC TGGGCACCGA AGTGCGCCTG ACAAACGAAG GTGAGCTCCT TATCCGCAGT
GACTGTATGT TCAGCGGTTA TTACAAAGAC CCTGAAAAAA CTGCCCAGAG CTTTAAAAAT
GGCTGGTTTG CCACCGGTGA TGCCGTCAAT ATAAACGAAA AGGGCCACCT GATATTCCTT
GACCGCCTGA AAGATTTGGG CGTGCTGGCA AGCGGGATAA AGTATGCCCC CCAGTATATT
GAAGGGCGAC TCCGCTTCAG CCCGTATATA AAAGATGCCA TGGTGGTTGG CGGTGAAGAC
AAGGACTATG TAACCGCCAT TATAAATATT GATTTTACTA TGGTCAGCAA GTGGGCGCAG
AAAAACCGCT TGAATTTCAC CACCTTTGTA GACCTTTCCC AGAAAAAAGA GGTTGCGGAT
TTGGTTGCCA AAGACCTTAT CCGGGTAAAC AGCTATCTGC CGGAAGGCTC ACGGGTAAAA
AAGTTTGTTT TGTTGCATAA AGAGTTTGAC CCTGATGAAG CCGAACTTAC CCGCACCCGT
AAACTTCGGC GGGGTTTTGT ATCTGAACGG TATAAAGACC TGATAGATGC CATGTACCAT
CTGGATAAGG AAGTAAAGGT GGAAGCGGCG GTAACCTATC GGGACGGGCG CAAGGGCGTG
GTGACTACCA GTATAAAAGT AAGGTCTTTG TAG
 
Protein sequence
MAEIDTIPKL VKHNAEQWGD KPAMCMKNLG IWQKYTWSDY YQTVKYFGLG LLSLGAKPAD 
RVSIIGDNEP EWFWAEFAAQ AIGAIPTGIY VDSIPDEVKY IARHAEVRIA VVNDQEQADK
FLELLPELLN LTKIIYWDPK GLKNYDDPML VSFKDVMKLG QEYERSHPGL FEQLLSDTKP
DDIAFIYYTS GTTGLQKGAM LSHRSLITTA KGFVARYPLN YKDDLISNFP ASWVGDSFFA
TIPHILSGAR LNFSEEPETV AEDTREIGPN FVIYGPRQWE SLVSEIQVKI IDAHPLKRLA
YKALSPLGYK MAEKTLAGSK PGLPLKIGHK IADGLLFHPL KDKLGVSKVR FGVTGSSVLS
LDTFKMIHSL GIELRQNYAS TEAGFISSHG KGDISFESVG RPALGTEVRL TNEGELLIRS
DCMFSGYYKD PEKTAQSFKN GWFATGDAVN INEKGHLIFL DRLKDLGVLA SGIKYAPQYI
EGRLRFSPYI KDAMVVGGED KDYVTAIINI DFTMVSKWAQ KNRLNFTTFV DLSQKKEVAD
LVAKDLIRVN SYLPEGSRVK KFVLLHKEFD PDEAELTRTR KLRRGFVSER YKDLIDAMYH
LDKEVKVEAA VTYRDGRKGV VTTSIKVRSL