| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_816 |
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| Symbol | livH |
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| ID | 8657749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 759798 |
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| End bp | 760682 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | branched-chain amino acid ABC transporter, permease protein |
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| Protein accession | YP_003330274 |
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| Protein GI | 270308216 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.648564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATT TATTGCAATA TATAATAACC GGCATTACGG TTGGTCTGGT GTACTCTCTT
ATTGCGCTTG GTTTTACTCT CATCTGGAAA TCTTCTTCGG TGGCTAATCT GGCTTTGGGG
CAGATGGTGC TTATCTGTTC GTGGTTTACC TACAGTATGC TGGCCCAGGT AGGCATGCCC
TTCTGGCTGG GGTTTATCTG TGTGGTTTTA TTTGCTCTGG CGCTGGGCTG GCTGATGGAA
AGGATTATCC TAAGGCCGCT TATCGGCCAG CCTATCCTTT CACTAGTTAC GGTGACGCTG
GGGGTGGGGT TTTTCCTTGA GGGTGTGGTC AGCTTTATCT GGCCACAAAG TGTGGCCGCC
CTGCCCAAGA TTTTCCCTGA AACACCTATC CACATAGGTT CGGCGGTTAT TTCACAGGAA
TATGTTTGGG CGGCCGGCAT ATCTTTGCTT CTTTTTGCTA TGCTGACCCT CTTTTTCAAA
TACCACAAAA TGGGGGTGGC TATGCGGGCT ACTGCTGATG ACCAGCAGGC CGTTCAAGCC
TGCGGTATAC CCGTAACCCG TATATTTTCC CTGTCCTGGA TGCTGGCCAT AGTACTGGCG
GCTGTGGGCG GGGTATTGAT GTCCAGCATA GGCGGTATCA CTCTGGGCTT GGTGGAAACC
GGTATCAAAG CCTTTTCAGT GGTGATACTG GGCGGGCTGG ATTCGTTTTT AGGGGCTATG
ATAGCCGGGC CTATTATTGG TCTGGCTGAA AATCTGGGAG GCGGGTATCT TACCTCCCTT
ACCTGGCCGG GCGTTAAAGA GGTAATACCC TTTATCATTA TTATCATCGT AATGTTCATC
AAGCCTTACG GCCTGTTTGG GCAGGAACGC ATCGAGAGGA TATAG
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| Protein sequence | MADLLQYIIT GITVGLVYSL IALGFTLIWK SSSVANLALG QMVLICSWFT YSMLAQVGMP
FWLGFICVVL FALALGWLME RIILRPLIGQ PILSLVTVTL GVGFFLEGVV SFIWPQSVAA
LPKIFPETPI HIGSAVISQE YVWAAGISLL LFAMLTLFFK YHKMGVAMRA TADDQQAVQA
CGIPVTRIFS LSWMLAIVLA AVGGVLMSSI GGITLGLVET GIKAFSVVIL GGLDSFLGAM
IAGPIIGLAE NLGGGYLTSL TWPGVKEVIP FIIIIIVMFI KPYGLFGQER IERI
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