| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_812 |
|---|
| Symbol | livF |
|---|
| ID | 8657745 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 755221 |
|---|
| End bp | 756012 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| Protein accession | YP_003330270 |
|---|
| Protein GI | 270308212 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAAG TAAATAACAT AGAGGTTACC TACCTGAACG TTATAAAGGT GCTTCACGGT
GTGTCACTGG AAATACCGGA GAGGTCTATA GTGGCATTGC TGGGTGGCAA TGGCGCCGGT
AAAACCACTA CTCTCAAAGC TATTTCAGGC TTGCTGCATA TTGAGGAAGG GCTGGTAACA
GACGGCAATA TTGAGTGGGA CGGCGACCGC ATTGACAAGA AAAATCCGGA AGCTATCGGC
AAGCTGGGCA TAGTTCAGGC TTTGGAAGGC CGCCATGTCT TTGAGCATCT TACCACTGAA
GAAAACCTGA TTGTAGGGGC TTTTAACCGT AAAGACCGTC AGAATATCAA ATCTGATTTA
TCTATGGTAT ATGAATATTT CCCCCGCCTG AGGCATGTTC AGCACAATAC TGCCGGATAT
CTTTCAGGCG GGGAACAGCA AATGCTGGTA ATAGGGCGTG CCATGATGGC ACGCCCAAAG
CTGATGATGC TGGATGAGCC TTCACTTGGC TTGGCACCGA TGATGGTCAA AGAAATATTC
GGCATTATCA AAAGATTTAA TGAAGAACAG GGTACATCAG TACTGCTAGT TGAACAAAAT
GTTAAGGTAG CGTTATCGAT TGCTCATTAC GGTTATGTAC TGGAGAACGG ACGGATAGTA
CTTGATGGAG ACACTTCATT TCTAACCAAT AATGAAGATG TTAAAGAATT TTATATGGGG
CTTTCCACGG TGGGCTCTAA GAAAAGTTAT CGTGAGGTCA AACATTACAA GAGGCGTAAA
AGATGGCTTT AG
|
|---|
| Protein sequence | MLKVNNIEVT YLNVIKVLHG VSLEIPERSI VALLGGNGAG KTTTLKAISG LLHIEEGLVT
DGNIEWDGDR IDKKNPEAIG KLGIVQALEG RHVFEHLTTE ENLIVGAFNR KDRQNIKSDL
SMVYEYFPRL RHVQHNTAGY LSGGEQQMLV IGRAMMARPK LMMLDEPSLG LAPMMVKEIF
GIIKRFNEEQ GTSVLLVEQN VKVALSIAHY GYVLENGRIV LDGDTSFLTN NEDVKEFYMG
LSTVGSKKSY REVKHYKRRK RWL
|
|---|
| |