Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_737 |
Symbol | ilvB |
ID | 8657670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 684969 |
End bp | 686678 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | acetolactate synthase, large subunit, biosynthetic type |
Protein accession | YP_003330197 |
Protein GI | 270308139 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00716267 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATTGA CAGGCGCCCA GATAGTATGT GAAAGCCTGC TTAAAGAAGG AGCAGATGTA ATCTTCGGGT ATCCGGGTGG AGTACTCTTG CCTCTGTACG ATACTTTCCC CCAGTATCCC GCCTTAAGGC ATATTCTGAC ACGGCATGAA CAGGGTGCCG CCCATGCCGC TGACGGCTTT GCCAGAGTTA CCGGTAAAGT AGGTGTCTGT CTGGCTACGT CTGGCCCTGG TGCTACCAAC CTGATTACCG GCATTGCCAA TGCATACATG GATTCTATAC CCATGGTAGC TATAACCGGT CAGGTTACCC GTAACCTTAT CGGCAAGGAC GCTTTTCAAG AGATTGATAT CACCGGTATT ACTTTACCAA TTACCAAGCA AAATTATCTG GTAACCAGAG CAAGTGCGCT GGCGGATACT ATAAAGGAAG CTTTTTATTT AGCCCGAACC GGACGCCCTG GCCCGGTACT GATAGATATA CCCAAAGACG TATTCATTGA ACAGGCGGAA TTTGAATACC CTGATGAACC GGATTTACCG GGTTACAAGC CTGTTATAAA AGGCAACCTG ATGCAGATAC AAAAAGCTGC CAAGCTGATA GAAACAGCTG AGAAACCGGT GATTATTGCC GGTCACGGGG TGAATATATC CGGTGCCAAC GAGGAACTTA AAACTTTGGC GGAAAACTGC CAGCTACCCG TTATTACCAC TCTGCTGGGT GTCAGCAGTT TCCCCGAAGA CCATATACTA AGTTATGGCA TGCTGGGTAT GCACGGTATG GCTTACGCCA ATATGGCTGT AGCAGCTACA GACCTGATAA TAGCTATCGG CATGCGTTTT GATGACCGGG TTACCGGAAA GCTAAGCTCA TTTGCTCCCC ATGCCAGTGT TATTCATATA GATATAGACC CTGCTGAAAT AGGCAAAAAT GTACGAGTAG ATGTACCTAT AGTGGGTGAC GTAAAAACCG TACTTAAATC ACTCAACAAG CAGGTAGAGT GCGTTCAGCA CCCGGACTGG CTAAGACAAC TGGAAAACTG GCGAAGGGAA CACCCTCCGC TTTCCATAAG GCATACTGAC CTTATCTTGC CTCAGTATAT AGTCCAACAG ATAAGCGAAG CTACCGGCGG CAATGCCATT GTGGTTACCG GTGTGGGTCA GCACCAGATG TGGGCGGCTC AGCATTACAC CTATATCCGC CCCAATTCTC TGGTAACCTC CGGAGGCTTG GGCACTATGG GCTTTGATCT GCCGGCCGCT TTGGGTGCCA AGGTTGGCTG CCCTGACGAA ACTGTCTGGT GCATTGCTGG TGACGGCGGA TTCCAGATGA ATATGCAGGA ACTGGCCACA ATAGTTCAGG AAAGGGCTGC GGTAAAAATA GCGGTCTTCA ATAACGGCTA TCTGGGTATG GTTCGCCAGT GGCAGGACTT GTTCTATAAC AAAAATTACG TGGCCACTCC TTTGGGCTGC CCTGATTTTA TAAAAATAGC CGAAGCCTAT GGTATACCGG CTTTAAACGT TAAACGCAAG GAAGAGGTCC GGCCGGCTAT TGAACAGGCT ATGTCTGCCG AAGGACCTTT CCTTCTGAAT TTTGTTATTG AACCTGAAGA AAACGTATAT CCCATGGTTC CTCCCGGCGC CGCTCTCCAC GAAGTACTGG AAGAACCTAA GAAAGAGGTG AGTGCATGCC CCCGACGAAG CATACCATAG
|
Protein sequence | MKLTGAQIVC ESLLKEGADV IFGYPGGVLL PLYDTFPQYP ALRHILTRHE QGAAHAADGF ARVTGKVGVC LATSGPGATN LITGIANAYM DSIPMVAITG QVTRNLIGKD AFQEIDITGI TLPITKQNYL VTRASALADT IKEAFYLART GRPGPVLIDI PKDVFIEQAE FEYPDEPDLP GYKPVIKGNL MQIQKAAKLI ETAEKPVIIA GHGVNISGAN EELKTLAENC QLPVITTLLG VSSFPEDHIL SYGMLGMHGM AYANMAVAAT DLIIAIGMRF DDRVTGKLSS FAPHASVIHI DIDPAEIGKN VRVDVPIVGD VKTVLKSLNK QVECVQHPDW LRQLENWRRE HPPLSIRHTD LILPQYIVQQ ISEATGGNAI VVTGVGQHQM WAAQHYTYIR PNSLVTSGGL GTMGFDLPAA LGAKVGCPDE TVWCIAGDGG FQMNMQELAT IVQERAAVKI AVFNNGYLGM VRQWQDLFYN KNYVATPLGC PDFIKIAEAY GIPALNVKRK EEVRPAIEQA MSAEGPFLLN FVIEPEENVY PMVPPGAALH EVLEEPKKEV SACPRRSIP
|
| |