Gene DhcVS_718 details

Gene Information

• Locus tag: DhcVS_718
• ID: 8657651
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 668209
• End bp: 668991
• Gene Length: 783 bp
• Protein Length: 260 aa
• Translation table: 11
• GC content: 46%
• Product: ABC transporter, permease protein
• Protein accession: YP_003330179
• Protein GI: 270308121

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.000115983
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGTCT GGAAGATGCC TTTTTGTATT CCATCCGCAC AGGAGGTGCT CTCAGCCATG 
AATAATATAC TGGCTATTGC TCAGAGGCTT ATCCGCCAAT TGCTCCATGA CCGGCGGACT 
ATGGCGCTGA TAATAGTAGT TCCGGTGGTG GTTATGGGGC TTATAGGTAT CAGCTTCCCT 
GATGCAACAG TGCTTGATTA TATTGCCCCG GCCATGCTGG CAACGCTGGC CTTATTTTTC 
AGTTTCCTGC TGACTGGCAT TTCATTTCTG AGGGAAACAT CTCAGGGTAC TATGGAAAGG 
CTTATGGCTG CACCCGTTTC CCGTCTGAAC ATAGTTGCTG GTTATCTTTT GGGTTTCTTC 
GTGTTTGCCT TGCTGCAAAC TCTTATCATT GTGCTTTTTA CTATCTATGT GCTGGGAGTT 
AACTTTCAGG GTGAACTCTG GCAGATACTA CTCTTTCAGG TGCTTATTAT TACCGGGGCG 
GTGACCCTGG GCATTTTCAC CAGCAGTTTT GCCAAAAATG AATTCCAAAT GGTTCAGTTC 
ATACCGCTTA TTATTGTTCC CCAGATATTT CTGTGCGGTG TCATCTGGCC GGTTTCCCAG 
ATGCCGGAGT GGCTTCAGTA TCTGTCAAAT ATATTACCGC TGACTTATAG TGTGGATGGC 
ATGCGTGAAA TAATGCTTCA GGGCAAAAAT CTGACTGAAT TAGGGTTTCA GTGTGGCGTT 
TTGATACTGT TTGCGGTTAT TACTACTGTT TTGGCAACAC TTACCGTACC CAAACGCCGC 
TAA 

 

Protein sequence

MPVWKMPFCI PSAQEVLSAM NNILAIAQRL IRQLLHDRRT MALIIVVPVV VMGLIGISFP 
DATVLDYIAP AMLATLALFF SFLLTGISFL RETSQGTMER LMAAPVSRLN IVAGYLLGFF 
VFALLQTLII VLFTIYVLGV NFQGELWQIL LFQVLIITGA VTLGIFTSSF AKNEFQMVQF 
IPLIIVPQIF LCGVIWPVSQ MPEWLQYLSN ILPLTYSVDG MREIMLQGKN LTELGFQCGV 
LILFAVITTV LATLTVPKRR