Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_709 |
Symbol | |
ID | 8657642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 662994 |
End bp | 664256 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | permease of the major facilitator superfamily |
Protein accession | YP_003330174 |
Protein GI | 270308116 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.768296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACAAA AAACAAACCC TGCGGCTTCT GAAAGAAAAA TCATGGGTTT CGCACCCAAC GTATTTTTTC TGGGGCTGGT AAGTTTTCTT ACCGATATCT CCAGTGAGAT TATTTTTACT CTTGTACCTC TTTTTCTGGC TAACGTACTG GGAGCAACTA CCACCATAAT CGGTTTTGTG GGAGGACTTT CAGACTCTAC GGAAGCAATT TTTAAAATTT TTAGCGGATA TCTAAGCGAC AAGATTAACC GTTGTAAAAG CCTGGCACTA TTCGGTTACG GATTTTCTGC ACTTTCAAAG CCGTTTATGC TTCTGGCAAA CAGCTGGGGA GTAGTAACCG GTGTCCGTTT TGCAGATAGA GTGGGCAAAG GGGTCAGGTC TTCACCCAGA GACGCCTTGA TTGCCAATTC GGTTGAAGTG TATGAACGAG GCCGCAGCTT TGGTTTGCAC AAGGCTATGG ATAGCCTGGG AGCAACTTTG GGTTTGGGTA TTGCGGCGGC GGTCATATAT TTCACCCAAA GCGGCAGCCT GACACTGGCA CCGGAAACAT ACAGGACACT GGTATGGTGG GGCATAATTC CGGCTTTTCT GGCAGTGGTG GTACTGGCTG TATTTGTTAA AGAAAAACGC CGCACTCAAA CCACCAAGCC CGTAGGTGAA AGGATTCGCT TCAATTTCCG CCATCTATTT TCAGGCATGG ACAGCCGCTT CAAGTTATTT CTATTAGTCA TGTTTTTATT TACTCTGGGC AATTCCAGTG ATTATTTCGT AATTCTGCGC GCACAGGATA TGAGTGTTTC GGTATTGGGA ATAAGCCTGA TGCTGGTAGT ATTTAACATA ACTTACAGTC TGGTTTCACT GCCTGCCGGC ATGCTCTCAG ACAAAATAGG GCGGAGGAAA GTGATAGCCA TGGGTTGGTT GTTTTACGCG CTGGTGTATT TGGGTTTCGC TGTTACTCAA AGCCAGACTG GCATCTGGAT ACTATTTGGC TGTTACGGGT TATACTACGG AATTGTGGAG GGAGTTGCAA AGGCTTTTGT GGCAGATATG ATACCGTCTG ATAAAAGGGG AACCGCCTAT GGCTTGTATC AGGGTGTAGT CGGGCTGACA TTGCTGCCGG CCAGCCTTAT TGCGGGTATT CTATGGGACA CTATAGATTC GGCAGCACCC TTTTACTTCG GGGCGGCAAT GGCTTTACTC GCGGTGATTG GTTTGCTGGT ATTTATCAAA GAACCATCAA CAAAAACACC TGTGTTAAGT TAA
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Protein sequence | MIQKTNPAAS ERKIMGFAPN VFFLGLVSFL TDISSEIIFT LVPLFLANVL GATTTIIGFV GGLSDSTEAI FKIFSGYLSD KINRCKSLAL FGYGFSALSK PFMLLANSWG VVTGVRFADR VGKGVRSSPR DALIANSVEV YERGRSFGLH KAMDSLGATL GLGIAAAVIY FTQSGSLTLA PETYRTLVWW GIIPAFLAVV VLAVFVKEKR RTQTTKPVGE RIRFNFRHLF SGMDSRFKLF LLVMFLFTLG NSSDYFVILR AQDMSVSVLG ISLMLVVFNI TYSLVSLPAG MLSDKIGRRK VIAMGWLFYA LVYLGFAVTQ SQTGIWILFG CYGLYYGIVE GVAKAFVADM IPSDKRGTAY GLYQGVVGLT LLPASLIAGI LWDTIDSAAP FYFGAAMALL AVIGLLVFIK EPSTKTPVLS
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