| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_700 |
|---|
| Symbol | |
|---|
| ID | 8657633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 655163 |
|---|
| End bp | 656080 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_003330165 |
|---|
| Protein GI | 270308107 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.365383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATTC AAGTGCAAAA TCTGGTAAAA GTCTACGGCC CTATACGGGC AGTAGATGGT
ATCAGTTTTG AGGTCAAAAA AGGTGAAGTC TTCGGTATGC TTGGGCCTAA CGGCGCAGGT
AAGACTACCA CAACCGAAAT TATTGAAGGT TTGCGTGATG CCGATTCCGG CAATATCACT
GTGATGGGTA TGGATGTACG CAAACAGCGT GAACAGATTA AACAGCTTAT CGGCATCCAG
CTTCAGGCTC CGGCTCTTTT GCCGCTGTTA AATGTAGAAG AAATATTAAA ACTTTTCACC
TCTTTCTACC GTAATTCTCT GCCGGTTGAT AAACTATTGG AAATGGTAGC GCTGACCGAA
AGCCGCAAGG TACTTTCTAA GAATCTCTCC GGTGGTCAGC AGCAGCGCTT ATCGGTAGCT
ATGGCTATGG TCAATAACCC GGAGATTACC TTTCTGGACG AACCCACCAC CGGGCTTGAC
CCTCAGGCCA GACGGGGTTT GTGGTCGGTT ATTGAAGAGC TGCGCGCACA GGGTAAAACA
GTCTTCCTCA CCACCCATTA TATGGACGAA GCTGAACGGC TTTGTGACCG GATTGCGGTA
GTAGACCATG GCAAGATTAT TGCTTTGGAT ACACCTAAAA AACTTATCTC AGGCAACTTT
AAAGAAAGCG CCATTGAGTT TGAAATGGAA CCTGTGCCCT CCGGTGAACT TCTGGGGTCT
TTTCCGTGTG TGACCAGTGC TTCAGTAGAA GGTTTTGAGG TTATTTTATA TTCGGCTGAT
ATCCCGAAAA CTATGGGTGC CATACTGGAT TATGCGGATA AAAACAAGGG TAATACCGAA
CTGCGTAATC TGCATGTCCG CCAGGCCACC CTGGAAGACG TATTCTTGAA ACTGACCGGC
AGGAAGATAA GAGAATGA
|
|---|
| Protein sequence | MVIQVQNLVK VYGPIRAVDG ISFEVKKGEV FGMLGPNGAG KTTTTEIIEG LRDADSGNIT
VMGMDVRKQR EQIKQLIGIQ LQAPALLPLL NVEEILKLFT SFYRNSLPVD KLLEMVALTE
SRKVLSKNLS GGQQQRLSVA MAMVNNPEIT FLDEPTTGLD PQARRGLWSV IEELRAQGKT
VFLTTHYMDE AERLCDRIAV VDHGKIIALD TPKKLISGNF KESAIEFEME PVPSGELLGS
FPCVTSASVE GFEVILYSAD IPKTMGAILD YADKNKGNTE LRNLHVRQAT LEDVFLKLTG
RKIRE
|
|---|
| |