| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_685 |
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| Symbol | trmU |
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| ID | 8657618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 640651 |
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| End bp | 641724 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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| Protein accession | YP_003330150 |
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| Protein GI | 270308092 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATA ATCCTGGACT GATAATGGTA GCTATGAGCG GCGGGGTGGA TTCCTCGGTT
GCGGCCATGC TCCTGCTTGA ACAGGGATAC GATGTAGCCG GGGTCAGCCT GCAGCTCAAG
TCCAACAATG AACCTTACGG CAACGGCTAT AACCTGAAAC TTATTAACCG GGCGCGTGAA
GTGGCGGCCG CTCTGGGTAT CCCCCATTAT GTGGTTGATT TGAGTGATAT TTTTTCCCAA
AGGGTTATTG CAGATTTCTG CCAGCAGTAT TCGCAGGGGC GTACTCCGAA CCCCTGTATT
CGTTGTAATT ATTATGTAAA GATAGGCGCT TTGCTTGATA AAATACCTGA TTTCAATGCC
GGTTATTTAG CTACCGGGCA TTATGCCCGT GTCCTTTCAG ATGGAAACGG CACTCACCTT
CTAAAAGGGG CCGATGAGAA AAAAGACCAG TCATATTTTT TATACACCCT GCCGCCTGCA
TCACTGTCCC GTCTTATGTT CCCACTTGGC AAAAGGTACA AAAAGGATAT TATCCGTTTA
GCGGCTAAGA TGAAACTGCC CGTTTCCCAA AAAGAAAGCC AGGATGTGTG TTTTATACCT
GATGGTGATT ATAAGTCTTT TCTGTCCACC CGTATGGGAT TTACCCCCGG CAAAATTCTG
GATAAAACCG GTAAAATACT GGGCGAACAT CAGGGACTAC CTCTTTATAC CATAGGTCAG
AGACAGGGAC TGGGGCTGGC TTCAAATGAA AAGCTTTTTG TATCTGATAT GAATCCGGAG
GCCAACACCA TTACAGTTGC CAGCCATGAC CAGCTGTATA CCAGCCGTAT ATTGCTGAGC
AACTTCATCT GGCGGGAAAG CAGTATTTCC ATAGATACCC CTGGTATGAT AGTCAAAGTC
CGCTACAAAG CCGCCCCTGC TGAGGTAAAA AAGATATCTC AAACAGGTGA TTTTCATTTA
CTCGAACTGG CAAGTCCTGT TTGGGCAGCT ACCCCCGGTC AGGCAGCCGT TATTTATCTG
GGTGATATGG TACTTGGCGG GGGTATTATT GAACACGGCG GGGACGCCGC CTGA
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| Protein sequence | MNDNPGLIMV AMSGGVDSSV AAMLLLEQGY DVAGVSLQLK SNNEPYGNGY NLKLINRARE
VAAALGIPHY VVDLSDIFSQ RVIADFCQQY SQGRTPNPCI RCNYYVKIGA LLDKIPDFNA
GYLATGHYAR VLSDGNGTHL LKGADEKKDQ SYFLYTLPPA SLSRLMFPLG KRYKKDIIRL
AAKMKLPVSQ KESQDVCFIP DGDYKSFLST RMGFTPGKIL DKTGKILGEH QGLPLYTIGQ
RQGLGLASNE KLFVSDMNPE ANTITVASHD QLYTSRILLS NFIWRESSIS IDTPGMIVKV
RYKAAPAEVK KISQTGDFHL LELASPVWAA TPGQAAVIYL GDMVLGGGII EHGGDAA
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