| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_675 |
|---|
| Symbol | |
|---|
| ID | 8657608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 630697 |
|---|
| End bp | 631839 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | protease |
|---|
| Protein accession | YP_003330140 |
|---|
| Protein GI | 270308082 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000159772 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAATCCT CTTTCAAGCT TGGGCAGATT CTGGGCATAG AGATAGGCAT TCATGTTTCG
TGGCTTATTA TCTTTGCCCT GCTCAGCTGG TCTCTGGCGG TAGCTTATTA CCCCGCAATA
GATGAAAATA TAAGCCCCCT TACCGCCTGG GTACTGGGCA TTACAAGCTG TCTGCTGCTT
TTCGGCTCGG TTTTAGCCCA TGAGCTGGGA CACTCTATTG TAGCTATACG CCACGGAATA
CCGGTTAAAA GCATAACCTT GTTTATCTTC GGCGGGGTTT CAAACCTGAC CAAAGAACCG
GATAACCCCG GAGCCGAATT CCGCATGGCT ATCTCCGGCC CGGCAGTCAG CATTATACTG
GCACTGGTAT TCTGGGCTTT TCAAGCTGCT TTTTCCGCTT TAGATGCCAC TTTAGTCAGC
GGAGTATTCC TGTACCTGGC TCAGATAAAT GCCATGCTGG CCATTTTCAA CCTTATTCCC
GGTTTCCCCC TGGACGGGGG GCGGGTACTC AGAGCTATTA TCTGGAATGC CTCAAACAGC
ATCAAAAAAG CAACCCGGAT TGCCGCCAGA GTAGGGCTGG GTTTTGCTTA CCTGCTAATA
TTCGGGGGCA TTGCCATTGC TTTCCTGGGT ATAGGAATAA GCGGCCTCTG GCTGGCACTG
ATAGGCTGGT TCATGGCTAC AGCCGCCCAG GGGTCATACC AGCAAACAGT TATTTCGGAA
ATACTCAGCG CAGTAAACGT AAGCAGAGTG ATGCGGCGTG AATTTAAAAC TATTGACCCG
GATAAAACAC TCTATCAGAC ACTTCACGAA TATATATTGC CGCTTAACCA AAGGGCGCTC
CCGGTATTTG AAAACGGGCA ACTTACTGGC CTGATAAGCC TGAGTGATAT TAAAAGAATC
CCCACAGATA AACTTGGCCA GACATACGTA CGGCAGGTAA TGACCCCCCT TGAAAAGCTG
CAAACTGTTG CTCCGGAAGA AAATCTGAGC AGTGTTGTAA ATATGCTGCA GTCCAAAGAT
ATTAACCAGC TGCCGGTTTT GTCAGATGGC AAACTGGTAG GCATTATTTC CCGTACCAGC
CTGATAGAAT ACCTGCAGAT GCGGCAGGAA ATGGAAACCA AGCAGCCGGA TGTAAAACAA
TAA
|
|---|
| Protein sequence | MKSSFKLGQI LGIEIGIHVS WLIIFALLSW SLAVAYYPAI DENISPLTAW VLGITSCLLL
FGSVLAHELG HSIVAIRHGI PVKSITLFIF GGVSNLTKEP DNPGAEFRMA ISGPAVSIIL
ALVFWAFQAA FSALDATLVS GVFLYLAQIN AMLAIFNLIP GFPLDGGRVL RAIIWNASNS
IKKATRIAAR VGLGFAYLLI FGGIAIAFLG IGISGLWLAL IGWFMATAAQ GSYQQTVISE
ILSAVNVSRV MRREFKTIDP DKTLYQTLHE YILPLNQRAL PVFENGQLTG LISLSDIKRI
PTDKLGQTYV RQVMTPLEKL QTVAPEENLS SVVNMLQSKD INQLPVLSDG KLVGIISRTS
LIEYLQMRQE METKQPDVKQ
|
|---|
| |