| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_672 |
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| Symbol | vpp1 |
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| ID | 8657605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 627695 |
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| End bp | 629821 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | V-type H(+)-translocating pyrophosphatase |
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| Protein accession | YP_003330137 |
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| Protein GI | 270308079 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000713061 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATCTAT CCTGGTTGGT GTGGACAGCA GGGCTTATTG CCGTGCTATT TGCCCTCTAC
CTGATTCGCG ATGTTATGCG TCGTGATTCC GGTACCCCGG CTATGCAGGA TATTGCCGGC
CGTATTCTTG AAGGCGCTGT AGCTTTCTTG AGGCGGCAGT ATCGCACCAT CGCTATTCTG
GCCATCGTGG CTGCAGTAGC TGTGGGTGCA GTGGTTGGTT TGCTAGGTGG CGAACGCGGA
CTGGAAGCCT ATGGCATAAC CGGTTTTGGT ATCGCCTGGC GGACTGCTCT TGCCTTCATG
GCAGGTGCTC TATGCTCCGG TATCTCTGGC ATTATCGGCA TGTACATCTC GGTTAAATCA
AACCTCAGAT GTGCCGCTGC TGCCGCAAAA GGTGGCCTCT CTGAAGCTGT TACAGTAGCT
ATTAGAGGCG GTGCTGTTTC CGGTTTCCTC ATTGTCGCTC TAAGTCTGCT TGGTGTTGCC
GGCATCTATT ACATGTACGG AGGCAATCCC GAAGTAACTC CCCATCTTAT TATCGGTTTC
GGTTTCGGTG CCAGTTTTGT GGCTCTGTTT GCCCAGCTGG GCGGCGGTAT TTATACCAAA
GCCGCTGACA TGGGTGCTGA CCTGGTGGGT AAAGTTGAAG CCGGTATCCC TGAAGATGAT
CCCCGCAATG CCGCTGTTAT CGCTGACCTG GTGGGTGATA ACGTAGGTGA CTGCGCCGGC
CGCGGTGCTG ATTTATTTGA ATCTACTGCT GCCGAAAATA TAGGTGCTAT GATACTGGGT
ATTACCCTTT ATCTGGCTAC AGGAAATGCT GCCTGGGTAC TCTTCCCGCT GGTTGTCCGT
GCCTTCGGCA TATTAGCCTC AATCATAGGT ATTATGTTCG TACGCGGTAA GGATAACGAA
AGCCCCATGA ATGCCCTTAA CCGCGGCTAC TTTACAGCTG TAGGTTTATC TATAATAGGT
ATCTTTATAG CTAATCAGAC TATTGGCGGT GACCTGTGGC TATTTGGTGC AGGCGTCATT
GGTATTCTTA CCAGTGTAGC CATGGTTTTC ATAACTCAAT ACTACACTGA ATTCCGTTAT
AATCCCGTTA AGGAAATTGC CAATGCCTCA CGCACCGGTC CGGCTACCAA TATAGTTTCC
GGTACGGCTG TCGGTCTTGA AACCGCCATG CCTACCGCTA TTACTATTGG TGCCGCCCTG
CTGCTTTCTT ACTGGATGGG CGGACAAACC GGTATCGCTG GCGGTGCTGT TTTCGGTACT
GCTGCCGCTA CCATGGGTAT GCTTATGACC TGCCCCTTCA TTCTTGCCAT GGATACTTTC
GGCCCCATTA CCGATAATGC AAACGGCGTT ATTGAAATGG CCGGAGTAGG CGGCAAAGTA
AGAAAAATTA CTGACCATCT GGATGCCGTT GGTAATACCA CCAAGGCTTT GACCAAGGGG
TATGCCCTGG CTTCTGCCGG TCTGGCTGCT TTCCTGCTCT TTGAGGCTTA TCTGGAGCGG
GTTGCCTTCC TTCGCGGTGA AACCGAAATG ATGGCGGTAG ACCTTTCACG CATTGAAGTA
TTCGTAGGCG GGTTGCTGGC TGTTGCCCTG GTATTCTTCT TCTCCGCCGT AGCTATCAAA
GCTGTGGGTA AAACTGCTTC CAAGATTATT GAAGAAGTAC GCCGCCAGTT TAAGGCCGAC
CCCGGTATTC TAGCCGGAAC TTCACGCCCG GATTATGCTC GTGCAGTAGA TATAACCGCT
GCCGCCGGTC TGCGCGAAAT GATTTTCCCC GGCCTGCTGC CCGTACTTTC CCCCATTATT
CTGGGTATTT TCCTTAGAGT AACCGGATAT GATTCCGCAA TGGCCATCGC CGGATTCCTG
ATGGTAGGTA CTATCGGCGG TATCATGATG GCCGCCTATC TGAATAACGC AGGCGGTGCC
TGGGATAATG CCAAAAAATA CATTGAAACA GGCGAAATGC TGGAAAAAGA TGGCAGTCCT
GTCATGAAAC ATACTGTTAC TCATGCCGCA ACTGTGGTGG GTGATACAGT AGGTGACCCC
TTCAAGGACA CTGCCGGTCC GTCAATCCAC GTACTGATAA AGTTGCTTTC TACCATTACT
CTGGTACTTG CTCCTCTTTT TATCTAG
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| Protein sequence | MDLSWLVWTA GLIAVLFALY LIRDVMRRDS GTPAMQDIAG RILEGAVAFL RRQYRTIAIL
AIVAAVAVGA VVGLLGGERG LEAYGITGFG IAWRTALAFM AGALCSGISG IIGMYISVKS
NLRCAAAAAK GGLSEAVTVA IRGGAVSGFL IVALSLLGVA GIYYMYGGNP EVTPHLIIGF
GFGASFVALF AQLGGGIYTK AADMGADLVG KVEAGIPEDD PRNAAVIADL VGDNVGDCAG
RGADLFESTA AENIGAMILG ITLYLATGNA AWVLFPLVVR AFGILASIIG IMFVRGKDNE
SPMNALNRGY FTAVGLSIIG IFIANQTIGG DLWLFGAGVI GILTSVAMVF ITQYYTEFRY
NPVKEIANAS RTGPATNIVS GTAVGLETAM PTAITIGAAL LLSYWMGGQT GIAGGAVFGT
AAATMGMLMT CPFILAMDTF GPITDNANGV IEMAGVGGKV RKITDHLDAV GNTTKALTKG
YALASAGLAA FLLFEAYLER VAFLRGETEM MAVDLSRIEV FVGGLLAVAL VFFFSAVAIK
AVGKTASKII EEVRRQFKAD PGILAGTSRP DYARAVDITA AAGLREMIFP GLLPVLSPII
LGIFLRVTGY DSAMAIAGFL MVGTIGGIMM AAYLNNAGGA WDNAKKYIET GEMLEKDGSP
VMKHTVTHAA TVVGDTVGDP FKDTAGPSIH VLIKLLSTIT LVLAPLFI
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