Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_632 |
Symbol | porA |
ID | 8657565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 593002 |
End bp | 594174 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | 2-oxoacid:ferredoxin oxidoreductase, alpha subunit |
Protein accession | YP_003330103 |
Protein GI | 270308045 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAGAG TAGGCTTAGA AGTTTCCATT GCCCTGAGTG AGGCAGTAGG GCTTTGCAAT GCTGATGTCA TTGCTGCTTA TCCCATTACT CCTCAGACTC ATATTGTTGA ACATTTGGCC GAGATGGTAG CCGAAGGTGA ACTGGATGCC GAATATATTC CGGTAGAATC TGAGCATTCG GCTCTGAGTG CCTGTCTGGG TTCGGCAGCA GCCGGCGCCC GCACCTTTAC TGCAACAGCC GGACAAGGGC TTGAGCTTAT GCACGAGGTG CTTTATGTGG CGTCTTCCAT GCGGCTGCCT ATTATGATGG CGGTTGCCAA CCGGGCTCTT TCCGGCCCTT TGTCGGTCTG GGGTGACCAC TCTGACGTAA TGTCTTGCCG TGATATCGGC TGGATACAAA TATTTACCGA AAACGGACAG GAAGTGGTTG ATAACACTAT CTGTTCTTTT AAAATAGGCG AAGACAAAAG GGTGCTTTTG CCTGTTATGG TTCACTTGGA TGGTTTCCAC CTTTCTCATG TTATCGAGCC TATTGATATG CCGGAGAGAG AGCAGGTAGA TGCCTTCCTC AGCGTTAATG ACTATCCGTA TGCACTGAAT CCCGATAATC CCCGCGCTAT GGGTGATTTT GCCCCTCCGG TTATTTTTAC CGAAGCAAAA TGGGCACAGG AGCAGGATTT CCAAAAATCC AAGGCTGTTA TTTTAGAGGT CTGGAAAGAT TTTGAGAAGC AGTTTGGCCG TTCTTACAAG CCGGTTGAGA CCTATCGCAC CGAAGGTGCC GAGAATCTGC TGTTTACTAT GGGTAGTTTC TCAGAGACTG CCATGGCCGC CATTGATAAA ATGCGTGATG ACGGCATGAG TGTCGGTCTG GTACGGCTTC GGTTGTGGCG TCCCTTCCCG TTTGAAGAGC TGCGCGCTGC TGTTAAAAAT GCCAAAAACC TTATCGTGCT TGATCGTGCC TTGTCAGTAG GCGGTCCGGG TGGTCCGGTC TGTTCTGAGA TTAAGGCTGC TTTATATCCT TTGGAGAAAA AACCCAAGAT TGTCAGTATT ATCGGCGGTT TGGGCGGACG GGATATTACC GTTGCCAATT TTGAGGATAT CATGAAGAAA GGTATGGCTA TTGCAGAAAA AGGCAGTCCT AACGAATATG AAATATATGG AGTGAGGGCA TAA
|
Protein sequence | MARVGLEVSI ALSEAVGLCN ADVIAAYPIT PQTHIVEHLA EMVAEGELDA EYIPVESEHS ALSACLGSAA AGARTFTATA GQGLELMHEV LYVASSMRLP IMMAVANRAL SGPLSVWGDH SDVMSCRDIG WIQIFTENGQ EVVDNTICSF KIGEDKRVLL PVMVHLDGFH LSHVIEPIDM PEREQVDAFL SVNDYPYALN PDNPRAMGDF APPVIFTEAK WAQEQDFQKS KAVILEVWKD FEKQFGRSYK PVETYRTEGA ENLLFTMGSF SETAMAAIDK MRDDGMSVGL VRLRLWRPFP FEELRAAVKN AKNLIVLDRA LSVGGPGGPV CSEIKAALYP LEKKPKIVSI IGGLGGRDIT VANFEDIMKK GMAIAEKGSP NEYEIYGVRA
|
| |