| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_63 |
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| Symbol | xerD1 |
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| ID | 8657017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 57561 |
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| End bp | 58559 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | site-specific recombinase, phage integrase family |
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| Protein accession | YP_003329564 |
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| Protein GI | 270307506 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGCACCG AAACTAGAGA AATAGTAGCG CCTAAAGTTA AGGATATTCT GAATAAATAT
GCCAAAGACA AGGGCATGTT GGTAGCCATA CTGCAGGATA TTCAGACTGA GTTTAATTAT
CTGCCCCGTC CCGCTCTGGA GGCCGTAAGC CAGGGATTGG GTGTTCCAAT GAGCCAGGTT
TACAGTGTTG CCACTTTCTT CAAGGCTTTC AGCCTGAAAC CCAAGGGCAA ACATTCTATT
CATGTGTGTA TGGGTACTGC CTGCCATGTA CGCGGTGCCA ACAAGATACT GGATAAGCTG
GTTGAAAAGC TGGGCTGCTG TGCAGGTGAA AACACCGAAG ACATGAAATT CAGCCTTGAT
GCTGTAAACT GTGTTGGTGC ATGTGCTTTG GGGCCTGTGG TTGTAGTGGA TGGCCAGTAT
ATGGGCAACA TGACTACCGA AAAGGTAAAA CCTTTGATTG AGGGATGCCA GTAA
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| Protein sequence | MSYRLSTQKS HDCSNIASYL LTAEDNLEKS LASFLLVCKV GQLSPATIHN YSYMVGKFID
FCSRNGVSTP PQITQLVVCL FIQELQMTNS AQSVLDYFKQ VRRFINWLRE NDQISIDPLK
NIRLPKVPRR IIQPFNKEQC QTLLDLVSLP TLEARRNKAI LMVFMDTGIR CQELADMKLE
DLNFETETIK IFGKGAKERV VRISRRTQKA LLEYQFERMK LMPNDKCPFV WVSRLKNRYS
RKQSHQLTND GIRRMIENLG KKAGIQNLRC SPHTFRHTFA TMSLLNGAGE FELQSLLGHS
TLTMTRRYTA SLTSQNAVLA HKKFSPVENM RL
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