Gene DhcVS_617 details

Gene Information

• Locus tag: DhcVS_617
• Symbol: clpP
• ID: 8657550
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 580972
• End bp: 581574
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 48%
• Product: ATP-dependent Clp protease, proteolytic subunit
• Protein accession: YP_003330091
• Protein GI: 270308033

Plasmid Coverage information

• Num covering plasmid clones: 48
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAGCC CTGAAAACGT AGTACCTATG GTTATTGAGA GCAGTGCCAG AGGCGAACGT 
GCCTTTGACA TTTATTCTCT ATTACTAAAG GAGAGGATTA TCTTTCTGGG TTCACAAATC 
AATGATCAGG TGGCCAACCT GGTGATTGCC CAGTTGCTGT TCCTTGACCG CGAAGACCCT 
GACAAGGACA TAAGCCTTTA TATTCACAGC CCCGGCGGCG TAATATCTGC CGGACTGGCC 
ATGTACGATA CCATGCAGCT TATCCGGCCC AAAGTATCTA CCATTTGCGT GGGTGTTGCG 
GCTTCCATGG CTACAGTTTT GCTGTGTGCC GGTGCCAAGG GTAAACGTTA TGCTTTGCCC 
AATGCTACCA TTCACATGCA TCAGGCTATG GGTGGCGCTC AAGGGCAGGC TTCGGATATT 
GAAATTGCCG CCCGCGAGAT TATGCGCCAG CAGGATATTC TGCGGAATAT CCTGGTAAAA 
CACACCGGCC AGCCTATGGA GAAAATTATC CATGACAGTG ACCGTGATTA TTACCTAAAT 
GCTCAGCAGG CTGTGGAATA CGGCCTGATA GATGAGATTT TGCAGAAACC CGAAAACAAA 
TAA 

 

Protein sequence

MISPENVVPM VIESSARGER AFDIYSLLLK ERIIFLGSQI NDQVANLVIA QLLFLDREDP 
DKDISLYIHS PGGVISAGLA MYDTMQLIRP KVSTICVGVA ASMATVLLCA GAKGKRYALP 
NATIHMHQAM GGAQGQASDI EIAAREIMRQ QDILRNILVK HTGQPMEKII HDSDRDYYLN 
AQQAVEYGLI DEILQKPENK